Gene Cagg_3053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3053 
Symbol 
ID7269470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3713158 
End bp3714222 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content58% 
IMG OID643567873 
ProductMethicillin resistance protein 
Protein accessionYP_002464347 
Protein GI219849914 
COG category[V] Defense mechanisms 
COG ID[COG2348] Uncharacterized protein involved in methicillin resistance 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000266593 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGTACGG GTATGAGGTG GTTCATCGGC ATTCCCGATC AGGTGCAGTG GGATGCCTTC 
GTCGCTGCTC ATCCGCACGG TAATTTGTTG CAGGCGAGTC CGTGGGGTAG GCTGAAAGAA
CGGTTTGGCT GGCATTGCCA CCGGTTGGCG GTGTTCGATT CGATGGGGAC CCCTGTCGCC
GGTTGCCAGG TGTTGTTTCG CCGAGCTTAT GGCTTGGCGT TCGGCTATGT GCCACGTGGC
CCGTTGTTGG CTGGCGATCC GGCCATTGAT GATCAATTAA TACGGGCGTT ACGATGGTTG
GGTTGGCGGA TGGCTGCGGT ACTGATCAGA TTGGAACCGA ATGTGTTGCT TGATGAACCC
CACGCGACAA CCCTGATGGA TTGGGTACAC CGTCATCGCT GGCCAATAGC CGAGACGATC
CAACCCCGTA GTACCATTTT GGTCGACCTC CAACCGACCG AAGAGGCGCT CTTCGCTGCT
TGCTCGAAGG GTCATCGCGC CGATATTCGC CGCGCCGAGC GACTTGGCGT GACCGTGCGG
GTAGGCGATG AAACTGATCT TACGACGTTT TACACTATTA TGCAGGCTAC CGGCAGTCGA
GCGTCATTTG CTATTCATAG TCCTGCGTAT TACACCGCTG CGTGGCGACT GCACCAGCCG
CATGCTCGGT TGCTGATCGC CGAACACGAT GGTGAGCCGG TTGCTGCTCA TCTGGTCTTC
GCCGATACGC GCTATGGGCG TTATCTCTAC AGTGGGGCAA CGGACGCCGG TTTGCGCAGT
GGCGCCAATC ATCTCCTTGA GTGGCATGCA ATGCGTTGGG CGCGCGCGCT GGGCTGTATC
GGTTACGATC TGTGGGGCAT CCCCGATGCC CTTGGTCAAG CCGCCTATGC GCCTGATGAA
CAGACCCGTC TGGCCCTCGA ACAAGCAGCC CACCATGACC CTCTAATCGG TGTCTATCGC
TTCAAGAAGG GATTTGGTGG CCGAATTGTG CGTTTTGTCC CGGCATTCGA TGTCGTGTTG
ATGCCACCAC TGTACGCGCT TGCGCGGCGT GTATTGGGAG GCTAA
 
Protein sequence
MGTGMRWFIG IPDQVQWDAF VAAHPHGNLL QASPWGRLKE RFGWHCHRLA VFDSMGTPVA 
GCQVLFRRAY GLAFGYVPRG PLLAGDPAID DQLIRALRWL GWRMAAVLIR LEPNVLLDEP
HATTLMDWVH RHRWPIAETI QPRSTILVDL QPTEEALFAA CSKGHRADIR RAERLGVTVR
VGDETDLTTF YTIMQATGSR ASFAIHSPAY YTAAWRLHQP HARLLIAEHD GEPVAAHLVF
ADTRYGRYLY SGATDAGLRS GANHLLEWHA MRWARALGCI GYDLWGIPDA LGQAAYAPDE
QTRLALEQAA HHDPLIGVYR FKKGFGGRIV RFVPAFDVVL MPPLYALARR VLGG