| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_3018 |
|---|
| Symbol | |
|---|
| ID | 7266549 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | - |
|---|
| Start bp | 3677084 |
|---|
| End bp | 3677809 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 643567840 |
|---|
| Product | ribosomal protein S3 |
|---|
| Protein accession | YP_002464314 |
|---|
| Protein GI | 219849881 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0092] Ribosomal protein S3 |
|---|
| TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0195481 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.00883263 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | TTGGGGCGCA AAGTACATCC GATCGGCTTC CGGCTCGGTT ATATCAAGGA TTGGCAGTCG
AAGTGGTTTG CCGAAGGCGA AACCTACACG AAGCAACTCC ATGAAGATAT CGAGCTGCGT
AAGCTGATTA GCAAGGAATT GCAAAGCGCT GGCGTGTCGC GGATCGAGAT TGAACGCTCG
GCAAATAAGA TCGAGATTTC GGTCTACACG GCAAAACCCG GAATCGTGAT CGGGAAACGC
GGCACGAATG TCGATACGTT GAAGAGCGCG CTGGAGAAAA AAACGGGTAA GAAGATTAAG
CTGAATATTA AAGAGATCAG CCAGCCCGAA CTCGATGCCC AACTGGTGGC CGAAAGTATC
GGTGAGCAGA TCACCAAGCG CGTTAGCTAC AAGCGTGCAA TGAAGCAGGC CGTCCAGCGT
GCAATGCGCT TGGGAGCGCA AGGCGTGAAG ATCCGCTGCT CGGGTCGTCT TGCCGGTGCC
GAAATGGCCC GCGTGCATGA AGAGGCAGAG GGCCGCGTTC CACGCCATAC GCTCCGGGCC
GATATTGATT ATGCACAGGT GCATGCCCAT ACGACCTACG GCCGGATTGG CGTGAAAGTC
TGGATCTATA AGGGAGATGT CTTCCCCAAC CAGAGCGCCA AGGCCTCTGT CGAGCAGCCG
GCGACCGCGC CCGCGTCTGA ACGGCGTGAA CGCGCGCCGA GGAGGAATAG CAATGCTTCT
GCCTAA
|
|---|
| Protein sequence | MGRKVHPIGF RLGYIKDWQS KWFAEGETYT KQLHEDIELR KLISKELQSA GVSRIEIERS
ANKIEISVYT AKPGIVIGKR GTNVDTLKSA LEKKTGKKIK LNIKEISQPE LDAQLVAESI
GEQITKRVSY KRAMKQAVQR AMRLGAQGVK IRCSGRLAGA EMARVHEEAE GRVPRHTLRA
DIDYAQVHAH TTYGRIGVKV WIYKGDVFPN QSAKASVEQP ATAPASERRE RAPRRNSNAS
A
|
|---|
| |