| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_3017 |
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| Symbol | rplP |
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| ID | 7266548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chloroflexus aggregans DSM 9485 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011831 |
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| Strand | - |
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| Start bp | 3676642 |
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| End bp | 3677097 |
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| Gene Length | 456 bp |
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| Protein Length | 151 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643567839 |
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| Product | 50S ribosomal protein L16 |
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| Protein accession | YP_002464313 |
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| Protein GI | 219849880 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0197] Ribosomal protein L16/L10E |
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| TIGRFAM ID | [TIGR01164] ribosomal protein L16, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00890597 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0081871 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCTTCTGC CTAAGCGCAC GAAGTACCGA AAAATGCAGA AAGGGCGCAG TCACGGCCTC
TCCTACCGCG GTAATAGCGT TGCATTCGGT GAGTATGGCC TGATGGCGCT CGAACCAAGC
TGGATCTCCA GCCGCCAAAT TGAGGCTGCC CGCCGCGCGA TTACCAATTA CGTCAAGCGT
GGTGGTAAGG TCTGGATACG GATCTTCCCG GATAAGCCGA TCACCCGCAA ACCCGCCGAA
ACCCGGATGG GCGGTGGTAA GGGTTCGGTC GATCACTGGG TTGCCGTGGT CAAGCCCGGT
CGCATTATGT TCGAGCTGGC CGGTGTGCGT GAAGATATTG CCCACGAGGC ACTGCGCCGT
GCCGCTCAGA AGCTGCCGGT TAAGTGCAAA GTGATCGATC GCGAAGAGCA AGGTACGATG
GCAACTGATC AGGAGGTGAG CAGTGAAAGC GAGTGA
|
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| Protein sequence | MLLPKRTKYR KMQKGRSHGL SYRGNSVAFG EYGLMALEPS WISSRQIEAA RRAITNYVKR
GGKVWIRIFP DKPITRKPAE TRMGGGKGSV DHWVAVVKPG RIMFELAGVR EDIAHEALRR
AAQKLPVKCK VIDREEQGTM ATDQEVSSES E
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