Gene Cagg_3016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3016 
Symbol 
ID7266547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3676449 
End bp3676655 
Gene Length207 bp 
Protein Length68 aa 
Translation table11 
GC content56% 
IMG OID643567838 
Product50S ribosomal protein L29 
Protein accessionYP_002464312 
Protein GI219849879 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0255] Ribosomal protein L29 
TIGRFAM ID[TIGR00012] ribosomal protein L29 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.011652 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00780318 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAAAGCGA GTGAACTGCG CGCCCTTGAT GATGCCCAAC TGCGCGCAAA GCTGAGCGAG 
TATAAGGTCG AGTTGTTTAA TCTGCGCTTC CAGAAAGCGA CCGGTAAACT CACCAATACT
GCTCGACCTA AGCAGGTGAA GAAGGACATT GCCCGCATCC TAACCATCCT GCGCGAGCGT
GAGTTGGCGC AGGCCGAGCT CGGCTAG
 
Protein sequence
MKASELRALD DAQLRAKLSE YKVELFNLRF QKATGKLTNT ARPKQVKKDI ARILTILRER 
ELAQAELG