Gene Cagg_2987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2987 
Symbol 
ID7266518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3660793 
End bp3661821 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content56% 
IMG OID643567809 
Product3-oxoacyl-(acyl-carrier-protein) synthase III 
Protein accessionYP_002464283 
Protein GI219849850 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID[TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00208212 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0221839 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTATGATA GAAAGGTCGC GAGGGTGAGT AGGGAACGTT ATGCGGCAGT AATTGGCTGG 
GGAATGGCCG TCCCCAATCG CGTGGTTACT AATGATGATT TAGCACAACG GATCGATACC
TCTGATGAGT GGATCCGTAC TCGCACCGGT ATCCGTGAAC GTCGGGTAGC TGGCCCCGGT
GAAAGCACTT CGACATTCGC AACTGCTGCC GGCCGAGAGG CTCTTGAGAT GGCCGGTGTC
TCGCCGGCAA CAATCGATAC TGTAATTGTC GCGACCTGTA CCCCCGACCG GCCCTTCCCC
GCTACTGCTT GCACAGTGCA AGCGAATCTG CAAATCCCAC GTGCTACTGC GTTTGATCTA
GCAGCGGCAT GTAGTGGCTT CGTGTACGGT TTGACGGTCG CAACCAGCCT CATTAAGAGC
GGTGTGAGCC GTCGGTTGTT ACTGATCGGC GCCGACATCT TTACCCATTA TATTAACTGG
AACGATCGCA ATACCTGCGT CCTGTTTGGT GATGGCGCCG GAGCTGTCGT ACTTGAGGCA
ACCGATGAGC CGTTAGGTCT GATCGCTTCT AACCTAAGCG CCGACGGTAA CCTCGAAGAC
CTAATGGCCG TTGACGCCGG GGGTACTCGT ATGCCACTTA CGGCTGAACT GCTTGCCGAA
GGCCGACAGT ATGTTTACAT GAACGGGCGC GAGATTTTTA AGCACGCCGT GCGGGAGATG
AGTGAGTCGG CATTGCACGT GGTGCAGGCT GCCGGGTTGA CCATCGATGA TATTGCGCTC
GTAATCCCCC ATCAGGCGAA TGTGCGAATT ATCGATGCCG TAGCACGACG TCTTGAACTA
CCGCCTGAGC GGGTGATGAT CAATCTCGAC CGGTATGGAA ACACGTCGGC GGCGTCGATC
CCAATTGCCC TCTACGAAGC AGCTCAACAG GAACGGATCA AGGCCGGCGA TTATGTCTTG
ATGACCGCCT TCGGCGGTGG TCTGACGTGG GGATCAGGGA TCGTGCGTTG GGGACGGCCG
AGTCGGTAA
 
Protein sequence
MYDRKVARVS RERYAAVIGW GMAVPNRVVT NDDLAQRIDT SDEWIRTRTG IRERRVAGPG 
ESTSTFATAA GREALEMAGV SPATIDTVIV ATCTPDRPFP ATACTVQANL QIPRATAFDL
AAACSGFVYG LTVATSLIKS GVSRRLLLIG ADIFTHYINW NDRNTCVLFG DGAGAVVLEA
TDEPLGLIAS NLSADGNLED LMAVDAGGTR MPLTAELLAE GRQYVYMNGR EIFKHAVREM
SESALHVVQA AGLTIDDIAL VIPHQANVRI IDAVARRLEL PPERVMINLD RYGNTSAASI
PIALYEAAQQ ERIKAGDYVL MTAFGGGLTW GSGIVRWGRP SR