Gene Cagg_2965 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2965 
Symbol 
ID7266496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3635903 
End bp3636919 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content51% 
IMG OID643567787 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_002464261 
Protein GI219849828 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000541635 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCCCCAT TGCTCGAAGT TCGTGACTTG CGTACCTATT TCCATACGCA AGATGGCATC 
GTCAAAGCAG TTGACGGTGT TTCTTTTTAT GTTAATCGGG GAGAAACGCT TGGTATCGTC
GGTGAGTCAG GTTGTGGTAA ATCTGTGACG TCACTTTCGA TTATGAGGCT CATCCCCAAC
CCACCGGGTA AAATTGTTGG TGGTCAAATT TTATTTGATG GCGAGGATCT GTTACAGGTC
AGTGAAGAAG AAATGCGCCG TATTCGTGGT AATCGGATTG CGATGATCTT TCAAGATCCG
ATGACGTCAC TGAATCCGGT ATTGACGATT GGCCGCCAAA TTACCGAGTC GCTTGAATTA
CACCTTAAGT TGAGCAAAAA AGAAGCTCGT GACCGCGCAA TTGAGTTGCT TGATATGGTC
GGGATTCCGT CACCGAGCAA GCGTCTTGAC AACTATCCGC ATCAGTTTTC GGGTGGGATG
CGTCAACGGG TGATGATCGC GATGGCGCTT TCGTGTAACC CTGAATTGCT GATCGCCGAT
GAACCGACGA CGGCGCTCGA CGTGACGATT CAGGCCCAAA TCCTCGAATT AATTAACCGG
CTACGCGAGG AATTAGAGAC TGCGGTAATC TTGATTACAC ACGATTTGGG TGTTGTGGCC
GGGATGACCG ACCGAGTGAC GGTGATGTAC GCCGGTAAGG TGGTTGAAGA GGGGCCAACG
GCCGAGATCT TTGCTAACCC TCGCATGCCG TATACGATCG GTCTGTTGCG CTCAATCCCG
CGGCTTGACG AAGAGCGAGG TCGCCGACTC AAACCAATTC GCGGCTTGCC ACCGAATCTG
ATCGACTTAC CACCGATTTG CCCCTTTAGC CCCCGCTGTG ATTATGCTCG CGAAGAATGT
TTAGCGAGTG TGCCGGAGTT GCGCCGGGTT GGCCCCGATC ACCGAGCCGC TTGCCACTTC
GATATTACGA TTGAAACTCC GGTACCACAA CAGACCACTT CCGATATTGC AGCTTAA
 
Protein sequence
MAPLLEVRDL RTYFHTQDGI VKAVDGVSFY VNRGETLGIV GESGCGKSVT SLSIMRLIPN 
PPGKIVGGQI LFDGEDLLQV SEEEMRRIRG NRIAMIFQDP MTSLNPVLTI GRQITESLEL
HLKLSKKEAR DRAIELLDMV GIPSPSKRLD NYPHQFSGGM RQRVMIAMAL SCNPELLIAD
EPTTALDVTI QAQILELINR LREELETAVI LITHDLGVVA GMTDRVTVMY AGKVVEEGPT
AEIFANPRMP YTIGLLRSIP RLDEERGRRL KPIRGLPPNL IDLPPICPFS PRCDYAREEC
LASVPELRRV GPDHRAACHF DITIETPVPQ QTTSDIAA