| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_2918 |
|---|
| Symbol | |
|---|
| ID | 7268790 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | + |
|---|
| Start bp | 3581573 |
|---|
| End bp | 3582505 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 643567739 |
|---|
| Product | alpha/beta hydrolase fold protein |
|---|
| Protein accession | YP_002464214 |
|---|
| Protein GI | 219849781 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000917268 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0712608 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTAC ATCCAACGAT GGATATCCCA TCTCATCTTG TTCCGTATGC TCGGCGTGTT
GCGCTATCTC ACTATGATAT TTTTTATTAT GACGCCGGCT CAGCAACTGC ACCCATCCTC
CTTCTTATCC ACGGTTTAGG TGATGAAGCC GATACGTGGC GTTCTATTAT TCCCCAACTC
GCCCGCCCCT ACCGTGTGAT TGCGCCCGAT CTCCCCGGCT TTGGCCGCAG TTCTGGTCCT
ACCAAGGGCT ACAGCCTCAC GTTCTTTGCC CGCACTATGG CTGAATTCAT CGGGAAGCTG
GGGTTGCCAT CGGTAACGCT GGTTGGGCAT TCGCTCGGTG CGATGATTGC CCAACGTCTA
AGTATCGGTC TACCCGGTGT CGTCCAACAG CAAATTCTGA TCGGCGGTTG CCTGCCGATC
AAGCGGCATT TCCCGCGCCT GGAGCAATGG ACGCTTCTCT TGCCGGGGAT CGGTGAGTTG
GTGTTAGCCG GGATGCAACG CTCGCAGGAG TTAGCCTTTC TCAGTCTGCA ACCCTTCTAC
GCGAATCTTT ATGCGTTACC TGCACGTGAG CAGCGCTTTT TACGTCGGCG AGTGTGGGCG
CGGATTCACC ACCCCATCCA ACGTCGGGCT ACCCTCTCGG CGTTGCGCTG GCTGGCAATC
GATGCCGTTT TCCGCTGTCA TCGCTACCTT GATCTGGTGA ACCAATGCCC AACGCCAACC
GTACTGATTG CCGGCGAACA CGACTTGATC GTCGATGGCG AAATGATCGA AGCAACTGAG
GTGTTGTTAG AGCAACATGC GCTTTATATT CATCTCGAGC GCTGTGGTCA TATGCCGCAT
CAAGAACGGC CCGATCAGAT CGTTCATCTG ATTGCCGAAT TGGTACCATC ACCGCTTCAC
GACGAATACC AATATCTCCA TTCTGATAGC TAG
|
|---|
| Protein sequence | MKLHPTMDIP SHLVPYARRV ALSHYDIFYY DAGSATAPIL LLIHGLGDEA DTWRSIIPQL
ARPYRVIAPD LPGFGRSSGP TKGYSLTFFA RTMAEFIGKL GLPSVTLVGH SLGAMIAQRL
SIGLPGVVQQ QILIGGCLPI KRHFPRLEQW TLLLPGIGEL VLAGMQRSQE LAFLSLQPFY
ANLYALPARE QRFLRRRVWA RIHHPIQRRA TLSALRWLAI DAVFRCHRYL DLVNQCPTPT
VLIAGEHDLI VDGEMIEATE VLLEQHALYI HLERCGHMPH QERPDQIVHL IAELVPSPLH
DEYQYLHSDS
|
|---|
| |