Gene Cagg_2910 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2910 
Symbol 
ID7268782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3570082 
End bp3571083 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content56% 
IMG OID643567731 
Producttranscriptional regulator, LacI family 
Protein accessionYP_002464206 
Protein GI219849773 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0171477 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTACCA TTCGCGAAGT CGCATTACGA GCCGGGGTTT CGCCATCGAC CGTCTCACAC 
ATCATCAACA ACACACGGTT CGTAGCACCA GAGACACGCG CACGGGTGCT AGCGGCGATG
GCCGAACTCA ATTACCGACC GAACATCTTG GCGCGTTCAC TACGCCGGGG TGAGACGCAT
ACCATCGGGC TGATTTTGCC CGATAGCGCT AATCCCTTCT TTGCCGAAAT CGCGCGGGCG
ATTGAAGATG CTGCATTTCG GGCCGAATAT AACGTCATTC TCGGCAATAC GGAAAACAAT
CTCGAACGCG AGCGAGTATA CGTTAATGTC TTCGTCCAAA AGCAGGTGGA TGGCTTGATC
TTTGTAGCCA CCGGTGACCA AAGCCCTTCG CTAGAGGAGC TATTGCAGCT AGGCATACCG
GTAGTCGTCG TTGATCGGCG GCTCCCCGGC CTTCAAGCCG ACACTGTTCT GACCGACAAC
CTACAGGGTG GGCTACAAGC AACGCGCTAT CTGTTAGAGC GTGGTCACCG CCGGATCGGG
TGCATTACCG GCCCTTCGCA TCTGACACCT AGTGCCGATC GGGTCGTGGG CTATCGGCAA
GCATTGACTG AATATGGAGT ACCTATCGAT GAGCGGCTAA TCCGGCGCGG TGATTTTCAC
CCGCACTCAG GGTATGCGTT AACCCACGAG CTGTTGCAAT CCGATCCACC GCCAACCGCC
CTGTTTGTAT GCAACGATCT GATGGCACTA GGCGCACTCC GCGCATTAGC CGAAGCCGGT
CGGCAGGTAC CACACGATTG TGCAGTGGTG GGGTTCGACG ACATTGAGTT AGCTTCTTAC
GCCAACCCAC CGCTCACCAC CATTCGTCAA GACAAAGCCA CGCTAGCAAC AATGGCAGTG
CAATTTTTGC GCGAACGGAT TGCGCTTACC GACATACCGG CCCGGACCTA CATCGTGGCA
ACGACGCTCG TGGAACGATT ATCAGGGGGA ACAACCGTAT GA
 
Protein sequence
MTTIREVALR AGVSPSTVSH IINNTRFVAP ETRARVLAAM AELNYRPNIL ARSLRRGETH 
TIGLILPDSA NPFFAEIARA IEDAAFRAEY NVILGNTENN LERERVYVNV FVQKQVDGLI
FVATGDQSPS LEELLQLGIP VVVVDRRLPG LQADTVLTDN LQGGLQATRY LLERGHRRIG
CITGPSHLTP SADRVVGYRQ ALTEYGVPID ERLIRRGDFH PHSGYALTHE LLQSDPPPTA
LFVCNDLMAL GALRALAEAG RQVPHDCAVV GFDDIELASY ANPPLTTIRQ DKATLATMAV
QFLRERIALT DIPARTYIVA TTLVERLSGG TTV