Gene Cagg_2906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2906 
Symbol 
ID7268778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3566757 
End bp3567683 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content56% 
IMG OID643567727 
ProductMonosaccharide-transporting ATPase 
Protein accessionYP_002464202 
Protein GI219849769 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1879] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0655902 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCACC TGTTACGGAT CGTCATCGTG CTAGGATTGA GTGCGTTAGC CGCATGTACA 
TCAACCACTC CGGCGGCAAC ACCGACAGCA CCGGCGCAGA GCAGCAGCAA CATCACGATT
GGTTTGGTCA TTTCAACCCT GAATAATCCC TTCTTTGTCA CCTTGCGAGA TGGCGCTCAG
CGTGCTGCCG ATGCCGCCGG AGTCACTTTA ACGATTGTAG ATGCTCAGGA TGACTCGGCC
AAGATGATTG CCGGGATCGA AGACCTGATT ACCAAGAAGG TCAACGCATT GATCATCAAT
CCCACCGATT CGGATGCGGT TGTGCCGGCC ATACAAAAAG CCAACGAGGC CGGGATACCG
GTTTTCACGG TCGACCGTGG CGCTAACGGT GGGACGGTCG TAAGCCACAT TGCCTCGGAC
AACGTAGCCG GTGGCCGGAT GGCAGCCGAG TTTCTCTGCA ACGCGCTGGG CGGCAAGGGC
AAAGTGGTCG AACTACAAGG CATCGCCGGT ACATCGGCAG CCCGTGATCG CGGCCAAGGT
TTCAACGACT ACATGGCAAG CTCGTGCAAA GGGGTTGAGA TCGTTGCTCA ACAGACTGCC
GACTTCAACC GCGACCGTGG TCTACGGGTG TTTGAAAACA TCTTGCAGGC GCAGCCCGAA
ATCAACGGTG TCTTCGCCCA CAACGACGAG ATGATTCTGG GTGCTATTCA AGCGGCCGAG
GCCGCAGGCC GCAGCGGGAT TGTGTTTGTC GGGTTTGACG CCATCGATGA CGCGACGAAA
GCGGTACAAG AGGGTAAGTT GGCGGCCACC GTTGCCCAGC AGCCGGCATT GATGGGTCAA
ACCGCAGTCG AAACGGTTGT GAAGTATTTA AAGGGCGACA AGGTTGAGTC CTCGATTCCG
GTACCGTTGA GCTTAGTGAC GAAGTAG
 
Protein sequence
MKHLLRIVIV LGLSALAACT STTPAATPTA PAQSSSNITI GLVISTLNNP FFVTLRDGAQ 
RAADAAGVTL TIVDAQDDSA KMIAGIEDLI TKKVNALIIN PTDSDAVVPA IQKANEAGIP
VFTVDRGANG GTVVSHIASD NVAGGRMAAE FLCNALGGKG KVVELQGIAG TSAARDRGQG
FNDYMASSCK GVEIVAQQTA DFNRDRGLRV FENILQAQPE INGVFAHNDE MILGAIQAAE
AAGRSGIVFV GFDAIDDATK AVQEGKLAAT VAQQPALMGQ TAVETVVKYL KGDKVESSIP
VPLSLVTK