Gene Cagg_2893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2893 
Symbol 
ID7268765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3549975 
End bp3552413 
Gene Length2439 bp 
Protein Length812 aa 
Translation table11 
GC content58% 
IMG OID643567715 
ProductATP-dependent protease La 
Protein accessionYP_002464190 
Protein GI219849757 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0466] ATP-dependent Lon protease, bacterial type 
TIGRFAM ID[TIGR00763] ATP-dependent protease La 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.490936 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0275961 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGACG AGACGCTGCA CGACCAACCG AACGAAGAGA CACCTGAGAC TCTGCCACTG 
ATTCCACTAG AAGGAGTAGT GGTCTTCCCG CATACTGTAG TGAGTTTGAC GCTCGACGAT
CTCGGTGTGC CAGCCGCCGA GGCCGCCGTG CGCGAAGGTC GTTATGTGTT GTTGGCGGCC
CGCCGACCCG ACCCGCCGGC TGATGCGCCG ATTGTCGAGC AGTTTTTTCG GGTAGGCGTA
GTAGCGCGCA TCGAGCAACT TGGTACGCTT CCTAACGGTT CGACCGGGGT GGTTGTGCGT
GGGTTGGTGC GGGCCGAACT GGGGGAAGCG ACGCAGACTG CGCCCTTCCT ACGCTTTACG
TTTACGCGCC GGCCTGATGT GTTTGAACGA ACTCCTGAAC TCGAACAGTT GATGGTAGAA
GCGCACGCTG CCATCGATGC TGTGCTCGAA TTGCGGCCCG GCGTGACCCA AGAGATTCGC
AATTTTGTGC GCTCTATCGA CGATCCCGGT CATCTGGCCG ATAATACCGG CTATTCGCCC
GATTACACCT TTGCCGAACG GCAAGACTTG CTCGAAACGT TTGATGTCGT CGAACGGCTG
CGTAAGGTAT GCGATTTTTA CCGCAAGCAG TTTGCGTTGC TCGAGGTGCA AGCGCGCCTC
CGCCAAGAAG TGCAAGAGAG CGCCGCGAAG CAGCAGCGTG AATTTTATCT GCGTCAGCAG
TTGAAAGCTA TTCAGAAGGA GCTAGGAGAA GATGGTGGCG AAGCTGCTGA GCTTGACGAC
CTGCGTCAGA AGCTGGCTGC CGCAAACTTA CCCGACGTGG CCCGTAAAGA GGCTGACCGC
GAGCTGAACC GATTGGCCCG CATTAACGCA AGCTCGCCGG AATATCAAAT GGTGCGTACC
TATCTAGAGT GGTTGGCCGA ACTACCGTGG AATAAGTACA CCGGCCAGCC GATTGATATT
GCATATACGC GGCAGGTGTT GGACGAAGAC CACCACGGCT TGCAGAAGGT CAAAGAGCGG
ATCCTTGAAT ATCTGGCGGT CAAGCAACGG CGTGCGCTGT TGGGCGAAGA GAATCTGCGG
GCTAATCGCG AGCCGATACT CGCGTTTGTA GGGCCACCCG GTGTCGGTAA GACGAGCCTC
GGGCAGAGTA TTGCCCGCGC TTTGGGGCGA AGCTTTGTTC GCATGAGCTT GGGTGGAGTC
CGCGATGAGG CCGAATTGCG CGGCTTTCGC CGCACGTATA TTGGTTCGCA GCCGGGGCGG
ATTATTCAAG AGCTGCGTCG CGCCGGTACG GCCGATCCGG TGATCTTGCT CGATGAGATC
GATAAACTCG GCATTGATTA CCGTGGCGAC CCGGCAGCCG CGCTGCTCGA AGTACTCGAC
CCGGAGCAGA ACCATACCTT TACCGATCAC TATCTCAACC TACCCTTTGA TCTCTCACGG
GTGCTGTTCC TCGCTACGGC GAACACGTGG GATACGGTGC CACCGGCATT GCGCGATCGG
ATGGAGGTGA TCGAACTCTC CGGCTATATC GAGGATGAGA AGGTGCAAAT TGCCCTGAGC
CATCTGGTGC CACGACAGTT GCGTGCCAAT GGCCTGCGCC CCGATGAGGC AACGGTAAGC
GAAGAGGCAT TGCGCTGCAT TATTAATGAA TATACGCGCG AAGCCGGTGT GCGTAACCTC
GAACGCTCGA TTGGTGCAGT GTTGCGTAAG GTGGCCCGTC GCCTCAGTGA GGGCGAGATT
GACCCGGCCA ACCTGCCGTT TGTGGTTGAT GCTGCCTTCG TGCGCACTGC CTTGGGGCGC
CCGCGCTTCA CCAACGAGAC TCGCGAACGG ATCGATCAAC CCGGTGTCGC GATTGGGTTG
GTCTGGACGC CGGTCGGTGG TGATATTATC TTTGTTGAGG CCAGTGCGGT CGAAGGAAAG
AAGGAGTTGA TCATCACCGG CCAGCTCGGT GATGTGATGC GCGAAAGCGC CGAAGCCGCG
CTGACATATG TCCGTTCACG GGCGCGCTCG CTTGGGATTG AGCCGAGCTT TTTCGAGAAC
CATGCCATTC ATATTCACGT GCCGGCAGGC GCAGTACCGA AAGATGGCCC CTCGGCCGGT
ATTACGATAG CAACCGCATT GGCTTCGGCG GCAACCGGTC GCCTGGTGCG TGATGATCTG
GCAATGACCG GTGAAATCTC GTTGCGCGGA CGAGTGTTGC CGATCGGTGG TATTAAAGAG
AAGGCGCTTG GTGCGCATCG AGCCGGTATT CGCACGATCA TTTTACCGAA GCGCAATATA
CACGATCTCG ATGATCTGCC ACCGAAGGTG AGCACTGAGA TGACGTTTAT TCCGGTTGAG
ACTCTCGATG AAGTGTTGAA TATTGCTCTG TTGCCGCCGG GTGAAAACGC GCCGGTCATT
ACGATACCAC CCCGTACCGA CGAGGTGCCG GTATCATGA
 
Protein sequence
MSDETLHDQP NEETPETLPL IPLEGVVVFP HTVVSLTLDD LGVPAAEAAV REGRYVLLAA 
RRPDPPADAP IVEQFFRVGV VARIEQLGTL PNGSTGVVVR GLVRAELGEA TQTAPFLRFT
FTRRPDVFER TPELEQLMVE AHAAIDAVLE LRPGVTQEIR NFVRSIDDPG HLADNTGYSP
DYTFAERQDL LETFDVVERL RKVCDFYRKQ FALLEVQARL RQEVQESAAK QQREFYLRQQ
LKAIQKELGE DGGEAAELDD LRQKLAAANL PDVARKEADR ELNRLARINA SSPEYQMVRT
YLEWLAELPW NKYTGQPIDI AYTRQVLDED HHGLQKVKER ILEYLAVKQR RALLGEENLR
ANREPILAFV GPPGVGKTSL GQSIARALGR SFVRMSLGGV RDEAELRGFR RTYIGSQPGR
IIQELRRAGT ADPVILLDEI DKLGIDYRGD PAAALLEVLD PEQNHTFTDH YLNLPFDLSR
VLFLATANTW DTVPPALRDR MEVIELSGYI EDEKVQIALS HLVPRQLRAN GLRPDEATVS
EEALRCIINE YTREAGVRNL ERSIGAVLRK VARRLSEGEI DPANLPFVVD AAFVRTALGR
PRFTNETRER IDQPGVAIGL VWTPVGGDII FVEASAVEGK KELIITGQLG DVMRESAEAA
LTYVRSRARS LGIEPSFFEN HAIHIHVPAG AVPKDGPSAG ITIATALASA ATGRLVRDDL
AMTGEISLRG RVLPIGGIKE KALGAHRAGI RTIILPKRNI HDLDDLPPKV STEMTFIPVE
TLDEVLNIAL LPPGENAPVI TIPPRTDEVP VS