| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_2787 |
|---|
| Symbol | |
|---|
| ID | 7269857 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | - |
|---|
| Start bp | 3425204 |
|---|
| End bp | 3425989 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 643567608 |
|---|
| Product | tRNA/rRNA methyltransferase (SpoU) |
|---|
| Protein accession | YP_002464086 |
|---|
| Protein GI | 219849653 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0566] rRNA methylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTATCA CCAGTCTTAC CAACCCAACT ATCAAAATGT TGCGCGCGTT ACGCCAGCGC
AAAGCCCGCG ATGAGCAAGG TCGCTACTTG ATCGAAGGTA TTCGTCTGGT CGGTGAAGCA
ATTCAGTGCG GCGCGCCACT CGAGATGATC ATCGTCGCTC CCGATTTGCT CACCAGCTCG
TTTGCCCACG AACTTGTCGA GCACTACATT GCCGGCGGTG GTCGTGTCTT GACCGTCAGC
GCCGAAGTAC TCGGTAGCCT GGCCAGTAAA GAGCATCCCC AAGGAATCAT TGGTGTGGGT
CGCGCTCGCT ACACTCCTCT TGCCGATCTG GTGGCGGGAG TCAACGGCTG GGTTGCGCTG
GTTGACGTCG CCGATCCGGG GAATCTGGGC ACCATTTTGC GAACTGCCGA TGGTGCAGGG
TTTAGCGGGG TCATTTTAAT CGGATCAACT GTTGACCCAT TTGATCCGGC CGCAGTTCGG
GCCAGTATGG GTGCTCTCTT CAGCCAGCAG ATCGCCCGTG CCGGTTGGGA TGAACTGCTT
GCGTGGCGGC AAGCACGCAG TCTACCCGTG ATTGGCAGCT CAGACCGTGG TACCGTCGAC
TATCGCACTG CTACTTACCC ACGACCACTC ATTTTGGTAC TTGGGAGCGA ACGGCAAGGT
CTCAGCGACG AGCAACTCGC CGCATGCGAT ACTGTAGTAC GCATTCCGAT GCGTGGGCGT
AGCGACTCGC TCAATCTAGC AGTTGCAGCG GGTATTCTCA TGTACGAAAT CACACGCGAC
ACCTAA
|
|---|
| Protein sequence | MLITSLTNPT IKMLRALRQR KARDEQGRYL IEGIRLVGEA IQCGAPLEMI IVAPDLLTSS
FAHELVEHYI AGGGRVLTVS AEVLGSLASK EHPQGIIGVG RARYTPLADL VAGVNGWVAL
VDVADPGNLG TILRTADGAG FSGVILIGST VDPFDPAAVR ASMGALFSQQ IARAGWDELL
AWRQARSLPV IGSSDRGTVD YRTATYPRPL ILVLGSERQG LSDEQLAACD TVVRIPMRGR
SDSLNLAVAA GILMYEITRD T
|
|---|
| |