Gene Cagg_2730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2730 
Symbol 
ID7269801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3354466 
End bp3355143 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content62% 
IMG OID643567553 
ProductABC transporter related 
Protein accessionYP_002464031 
Protein GI219849598 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCAAC CGCTGATCTT GCTCTCATCC GTCACTAAAG CCTATGCCAC CGCCGCTGGC 
GACTATCTCG CCTTGCGCGG CATCGATCTG CGGATCGAGC CAGGCGAGTT TGTCGCGATT
GTAGGCAAAT CGGGCAGCGG CAAATCAACC TTGCTCAATG TCATCACCGG CATTGACCGG
GCCAGCAGCG GCGAGGTGTT GGTGGCCGGG GCCGATCTGA TGCGCATGCC CGCCGCACAG
ATGGCGGCAT GGCGCGGACG CACGGTCGGA ATCGTCTTCC AGTTTTTTCA GCTCTTGCCG
ACCCTCACCG CGTTGGAAAA TGTGATGTTG CCGATGGATT TTGCCAATCT CGGCACACCT
CGCGAACGGC GTGCGCGGGC ATTAGCATTG CTCGAGCGGG TGGGGCTGGC CGATCAAGCC
GAGAAGTTGC CGCTGGCCTT GTCGGGCGGG CAGCAGCAGC GGGTGGCGAT TGCGCGCGCA
TTAGCTAATA ACCCGCCGCT GCTGGTGGCC GACGAGCCGA CCGGCAATCT CGATTCGCAG
ACCGCCGAAG CGGTCTTTGA ACTGTTTGTC GAACTAGCCG GTCTCGGTAC GACAATCGTC
ATGGTGACGC ACGATAGTGA GTTGGCCCGG CGGGCCGGAC GGATGGTGCT GGTGGCCGAT
GGTCAGATTG TGGGTTGA
 
Protein sequence
MNQPLILLSS VTKAYATAAG DYLALRGIDL RIEPGEFVAI VGKSGSGKST LLNVITGIDR 
ASSGEVLVAG ADLMRMPAAQ MAAWRGRTVG IVFQFFQLLP TLTALENVML PMDFANLGTP
RERRARALAL LERVGLADQA EKLPLALSGG QQQRVAIARA LANNPPLLVA DEPTGNLDSQ
TAEAVFELFV ELAGLGTTIV MVTHDSELAR RAGRMVLVAD GQIVG