Gene Cagg_2692 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2692 
Symbol 
ID7269599 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3293731 
End bp3294489 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content56% 
IMG OID643567518 
ProductRNA methyltransferase, TrmH family, group 3 
Protein accessionYP_002463996 
Protein GI219849563 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID[TIGR00186] rRNA methylase, putative, group 3 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.107399 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.310165 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCCG AGTTGCTCTA TGGGCGCAAC GCGGTACGTG AGGCTCTCCG CGCTCGACGT 
CGCACGTTGC GCCGTTTAGT TGTTTCACGT AGTGTCCAGG AAAGTGGTAT CATCGCCGAC
ATTATCCGGC TCGCCGAACA GGCCGGTATT CCTATCGAGC GGATCGAACG GCAGATCCTC
GACCGCCAGT TGCGCGATGC AAATCATCAG GGCGTCATGC TCGAAACCGG CCCCTACCCC
TACGTCGAAC TCGATGAATG TCTCAGTAGT GCTAACGCGC GCCGCGAAGC AGCCCTCTTA
CTGCTGCTTG ATCATCTGCA AGACCCGCAG AATCTCGGTA CCCTTCTGCG CACCGCTGAA
GCGGTTGGCT GTCACGGGAT CATTATTCCG GGTCGGCGGG CTGCCGAAAT TACACCGGCA
GTGGTGAATG CCAGCAGTGG TGCGGTTGAA CATCTCCGTG TTGCTATGGT GACTAACCTA
TCGCAGACCA TCGAGGAGTT GCAACACAAC GGGATTTGGG TTGTCGGTCT TGAGCAAGAT
GAAACAGCAC AAGATATAGA TGCTGTTGAT CTTAATCTCC CACTTGGACT CGTCATCGGT
GCCGAAGGTA CCGGTATGTC GCGCTTAGTA CGCGAACGGT GCGATTTTTT GGTGCGCTTA
CCGATTGTCG GGCAGATCGG TTCGCTCAAT GCGGCGGTCG CCGGTAGTAT TGCCATTTAT
CACGCCTGGC GCCAACGTTA CCGACGATAC GCCGAATAA
 
Protein sequence
MTSELLYGRN AVREALRARR RTLRRLVVSR SVQESGIIAD IIRLAEQAGI PIERIERQIL 
DRQLRDANHQ GVMLETGPYP YVELDECLSS ANARREAALL LLLDHLQDPQ NLGTLLRTAE
AVGCHGIIIP GRRAAEITPA VVNASSGAVE HLRVAMVTNL SQTIEELQHN GIWVVGLEQD
ETAQDIDAVD LNLPLGLVIG AEGTGMSRLV RERCDFLVRL PIVGQIGSLN AAVAGSIAIY
HAWRQRYRRY AE