Gene Cagg_2625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2625 
Symbol 
ID7267216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3216357 
End bp3218984 
Gene Length2628 bp 
Protein Length875 aa 
Translation table11 
GC content54% 
IMG OID643567451 
Productmulti-sensor signal transduction histidine kinase 
Protein accessionYP_002463930 
Protein GI219849497 
COG category[T] Signal transduction mechanisms 
COG ID[COG2205] Osmosensitive K+ channel histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCAA TTCGCTCAAG CATCCAGCTT AAAATCTTGC TCTTGCTGCT CGGTCTCGCC 
TTACCGCCAT TGATAGTTGT CGGCTGGCTT GGACTGAGCA GTTTACATAT TGCTCGCGAA
ACTGCCGTGA ATGAGGGCAC GGATGCGCTT CGCCAACAAG CGACAGCGAG CTTGCAGCAG
CGGGCGACCG ATAAGGCACA GTTTTACGAT GCAGCCCTGA TCGGCGTTCA ACAACAGGTT
GAGGCAGTCG CGGGGTATGC ACTCGAGCGA TACGAATCCT CAGGCGCAAC GAATAACCGC
GAGCGGGTGT GGGTGGCACC GCGGCCAACC GATGAACTCT TGCGCCGCTA CGCTCCTCAG
GTCACTTACG TGCGCCAAAT CATTCCGATC TTGCGCACGA TGGTCGCCAA TAATCCCCTG
GTCAACATCG GCTATATCGC GCTTGAGGAG GGTGGTGTGA TCGCCTTTGA CGATGAGGCG
GTGATTGACC AGTTGCTCAC CCTTGAAGCG TTCGATCCAC GGGTACGACC GTGGTATACC
GAGGCGCGCG CTGCCGGTAC AACCGTGTGG ACGGCGCCTT ACATCGATGC CAATACCGGC
CTGTTGGCAA CGACATGTGC CCGCCCGCTG TATGATCGAC AGGGGCAGTT TATCGGCGTA
GTTGCGTTTG ATCTGTTACT CAACACCATT CAGCAAGACT TGCTAACAGT TGATGTCGGT
TCTAACGGCT ATGCGTTCTT GGTCAATGCC AACGGTGATG TTGTTGTACG CCCGGATATG
CAGGCTGTGG GTCGGTGGGA CCAGCCATAC CGCACCGAGA ATTTGCTCAA TGCTGCCAAT
GCCGATCTGC GCACGGTCGC CGAGCGGATG GTCGCCCGAC AATCAGGGGT CCAGTTGATC
CAAGAACAAG GACAGGTGAG TTACGTTGCG TATGCTCCGA TCACCACGGC AGGTTGGAGC
GTAGCTCTGG TCATTCCGGC AGATGAGATC GATGAACCGG CGATTGCCAC CGGTGCCCGT
CTTAGTGAGA GTCAAAGCCG GTTGTGGAAC CAGTTGGTGG CGACGCTACT GTTGATTATT
ATGTTGATTA GTCTGCTGGG TCTGTTACTC TCGCTCTCTT TCACCAACCG GATCAGTGTG
CTGCGTGAAG GTGTACGTGC GGTGGCCGCC GGTGATTTGT CACAACGGTT GCCGCCTGCC
GGTAATGATG AGATTGGTCA GTTGGTTGCT GCTTTCAACC AGATGACCGA TACGTTGCAG
AGCAAAATTG CCGAATTGGA AGAGAATGCT CGCCAATTGG CAACGCTGAA TGCGGTCTCG
AACGAATTGA AAAGCATTCT TTCGTGGCCG GTATTGCTCG AAACGATCCC AAAATTGGTC
TGTGAGCGGT TTGGGTTCGA CCGCGCTGTG CTGTATCTCG TTGATGGCGA TGTGCTACGG
GCGGTGAGTG CATCGTTTAG CCCCGGCAAT GAATGGCAAG CCCAGCAGTT TCTCGCCGTT
GCCAATGCTA ACCCACTCCG TATCGACGGG GGGAGTGTCG AGGCCGATGT TGTGCGCAGC
CGCAAAGCCA TCATCATTGA TAATCCGTGG GAACATCCAC GGGTCGATAA AGCGAAACAG
GCCATCTCTG CCAGTCGCTC GTATGTGCAG GCACCGATCT TTGGGCGTAA CGATACGGTG
ATCGGTATTA TCTCGGCTGA TTACAAACTG AGCCAGCGAC CGGTACAGGC GCGCGATGCC
GCTCAATTGC TCACCTTTGC CAGTATGGTC GGTCTGACCA TTGAGAACGT CCAGCTCTAT
AATGAGCTTG AGCGGCAGGT AGCACAGCGT ACTGAAGAAT TGCGCGCTGC GTTGGAACGG
GCACAGTTGG CCGACCGTCG CAAGAGCGAT TTTCTCGCCA GCATTAGCCA TGAGTTGCGC
ACACCGTTGA ATGCGATTAT TGGCTTCTCA ACCGTCTTGC TCGATGATAC TGAGCAACCA
TTGACGCCAA CTCAGCGTGA AGATGTGCAG AGTATCAACC GCAATGGCCG ATTCTTGCTC
CACTTGATCA ATGAGTTACT CGATTTAGCA CGAATCGAAG CCGGTCACCT CAATCTTGAA
CTAGGGTCGG TCGATCTCTG TCAGGTCACC GCTGAGGTTT GCGATACGGT GCAGACGTTG
TTGCGTAATC GACCGGTGAC GCTACGGAAT GCGTTACCGA TGGTGTTACC CGATGTCGTT
GCCGATAGCG ATCGCTTGCG TCAGATACTG TTTAATCTGC TCTCGAATGC GATTAAATTC
ACAGAACGTG GTACCATTAC GGTAAGTGCT CAGGTACTTG ATGAGGTCAA TGAAGACGGT
AAACTCTGTC GGTATGTTGC GGTGAGTGTG TCGGATACCG GCATCGGCAT TCCACACGAG
CGGCAACAAG ATATCTTTGG CGAGTTTGTG CAGATTCACG GTCGGCGATC ACGGCTTGGT
GGTACCGGGT TAGGATTGGC GATCACCCGC AAATTGGTAG AGGCCCAAGG CGGGCGAATC
TGGGTTGATA GCATACCGGG CATTGGTTCC ACCTTTACCT TTACGCTACC GGTTGCTCAA
CCGGCCTTCA CGACTGAGCC GGATGAGGCT AACGTCACAA CACTATGA
 
Protein sequence
MNAIRSSIQL KILLLLLGLA LPPLIVVGWL GLSSLHIARE TAVNEGTDAL RQQATASLQQ 
RATDKAQFYD AALIGVQQQV EAVAGYALER YESSGATNNR ERVWVAPRPT DELLRRYAPQ
VTYVRQIIPI LRTMVANNPL VNIGYIALEE GGVIAFDDEA VIDQLLTLEA FDPRVRPWYT
EARAAGTTVW TAPYIDANTG LLATTCARPL YDRQGQFIGV VAFDLLLNTI QQDLLTVDVG
SNGYAFLVNA NGDVVVRPDM QAVGRWDQPY RTENLLNAAN ADLRTVAERM VARQSGVQLI
QEQGQVSYVA YAPITTAGWS VALVIPADEI DEPAIATGAR LSESQSRLWN QLVATLLLII
MLISLLGLLL SLSFTNRISV LREGVRAVAA GDLSQRLPPA GNDEIGQLVA AFNQMTDTLQ
SKIAELEENA RQLATLNAVS NELKSILSWP VLLETIPKLV CERFGFDRAV LYLVDGDVLR
AVSASFSPGN EWQAQQFLAV ANANPLRIDG GSVEADVVRS RKAIIIDNPW EHPRVDKAKQ
AISASRSYVQ APIFGRNDTV IGIISADYKL SQRPVQARDA AQLLTFASMV GLTIENVQLY
NELERQVAQR TEELRAALER AQLADRRKSD FLASISHELR TPLNAIIGFS TVLLDDTEQP
LTPTQREDVQ SINRNGRFLL HLINELLDLA RIEAGHLNLE LGSVDLCQVT AEVCDTVQTL
LRNRPVTLRN ALPMVLPDVV ADSDRLRQIL FNLLSNAIKF TERGTITVSA QVLDEVNEDG
KLCRYVAVSV SDTGIGIPHE RQQDIFGEFV QIHGRRSRLG GTGLGLAITR KLVEAQGGRI
WVDSIPGIGS TFTFTLPVAQ PAFTTEPDEA NVTTL