| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_2614 |
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| Symbol | |
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| ID | 7267205 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chloroflexus aggregans DSM 9485 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011831 |
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| Strand | + |
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| Start bp | 3200886 |
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| End bp | 3201923 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643567440 |
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| Product | RNA polymerase, sigma 70 subunit, RpoD subfamily |
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| Protein accession | YP_002463919 |
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| Protein GI | 219849486 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00168562 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAAGC GTCGCCTATC CAACTGGAGC CAAGAAGATG TGTCGTTTCC TGCGCACGAG
CGTGAAGACC GTTTCGGGCA CGAAGACGAG TTGTTTAATC CCGATCTCGG TGAGGTAGAA
CAGTTTGAGC CATCGCTCGA TGCGGTGCAG CACTACCTCC AAGAGATCGG TCGTGTTGCA
TTACTTACTG CCGTTGAAGA GGTGGAGTTG GCCGAGCGTA TCGAGCGAGG CAATGCAGCC
GAACAGCGGT TGGCCACCGC TACCGACCTC ACACCGCGCG AGCGCTGTGA GTTGTTGAAG
GCGGTGCAGG AAGGCGAAGA GGCTCGCCGT CATCTGATTC AGGCCAACCT GCGGCTCGTG
GTCAGCATTG CTAAGAAGTA TGTTGGCCGC GGCCTCTCAC TGCTCGATCT GATCCAAGAG
GGGAATATCG GCCTGATGCG GGCGGTTGAA AAGTTTGATC ACCATAAAGG CAATCGCTTC
AGCACCTACG CCACCTGGTG GATCCGACAA GCCGTCACGC GCGCCCTTGC CGAACAAGGC
CGCACCATTC GGCTGCCGGT GCATATGAGC GAGTCGGTGG CGCAGGTAAA GCGGATCGCT
GATCGGCTGG CCCAATCACT TGAACGCCAA CCAACACCCG AAGAGATTGC GATGGCCCTC
GGTCAACCGG TTGAGCGGAT CCAGCGCATT CTCGAAGCGG CTCGCTGCCC TGTCTCGCTT
GAGACGCCGG TAGGTGATGA AGGAGAACAT ACGCTCGGCG ACTTTATTAC CGACGAAGAG
TTGCCGGCGC CCGGCGAGAT CGCTGCCCAA AAGTTGCTCC ATCGCGATCT CTGCGCTGCG
CTCAATCAAC TGAGCGACCG CGAGCGCCGG ATTATCGATC TACGGTACGG TCTGCTCGAT
GGCCGTCGCC GTACTCTCGA AGAGGTTGGT CGTGTGCTCG GTATGACGCG GGAGCGTGCT
CGCCAGATTG AGGCCGAGGC TCTGCGCCGT CTGCGTAGTC CCGAAATCGG TCAACACCTG
CGCGATTATT TGGATTGA
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| Protein sequence | MLKRRLSNWS QEDVSFPAHE REDRFGHEDE LFNPDLGEVE QFEPSLDAVQ HYLQEIGRVA
LLTAVEEVEL AERIERGNAA EQRLATATDL TPRERCELLK AVQEGEEARR HLIQANLRLV
VSIAKKYVGR GLSLLDLIQE GNIGLMRAVE KFDHHKGNRF STYATWWIRQ AVTRALAEQG
RTIRLPVHMS ESVAQVKRIA DRLAQSLERQ PTPEEIAMAL GQPVERIQRI LEAARCPVSL
ETPVGDEGEH TLGDFITDEE LPAPGEIAAQ KLLHRDLCAA LNQLSDRERR IIDLRYGLLD
GRRRTLEEVG RVLGMTRERA RQIEAEALRR LRSPEIGQHL RDYLD
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