Gene Cagg_2594 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2594 
Symbol 
ID7267185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3171976 
End bp3172734 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content54% 
IMG OID643567420 
Producthypothetical protein 
Protein accessionYP_002463899 
Protein GI219849466 
COG category[S] Function unknown 
COG ID[COG0217] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01033] DNA-binding regulatory protein, YebC/PmpR family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000460429 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCCGGCC ATTCGAAATG GCACACCATT CGGCGTGCGA AAAGTGCCAA TGACCAACGG 
CGTGGTCAGC TCTTTACCAA ATTAGCACGC GACATTACAA TTGCGACCCG TGAAGGCGGT
AGTGGTGATC CCGAACTCAA CTTCCGCTTA CGGCTCGCCA TCGAAAAAGC TCGCGCCAAC
AACATGCCGA ACGAGAATAT CCAACGTGCG ATTGAGCGCG GGTTGGGTAA ATCGAATGAA
GCTGCTATCG AAGAAATCTT CTACGAAGGG TACGGTCCCG GTGGTGTGGC AATCCTGATC
GAAGCCGCGA CCGATAATCG CAACCGTACC AGCTCGGATG TGCGCGCGAC CTTTAATAAG
AACGGTGGTA GCCCCGGCGA ACCCGGCTCG GTGTCGTGGA TGTTCGAGCA AAAGGGCCTG
ATCACGGTTG ACCTGAGCGC TACCAAGCGT GATCCCGATG AGCTGCAACT CCTTGCTATC
GATGCCGGGG CCGACGACGT TATCGTCGAT GACGAGACGC TTGAGATTTA CTGCGAATGG
ACGCAACTGA ATGCTGTTCG CCAAGCCTTG CTCGATCAAG GGGTGCCGAT CAGCAACGCC
GAAAAGATTA TGCGCGCCAA AACCCTGATT CAACCTGATG AAAAGGATGC GCTGGCGGCG
CTGCGCTTGA TTGAAAAGCT CGAAGACCTC GATGACGTAC AGAAGGTCTA TTCGAACCTC
GATATTACCA CCGAACTGGT CGAACGCTTC GATTCGTGA
 
Protein sequence
MSGHSKWHTI RRAKSANDQR RGQLFTKLAR DITIATREGG SGDPELNFRL RLAIEKARAN 
NMPNENIQRA IERGLGKSNE AAIEEIFYEG YGPGGVAILI EAATDNRNRT SSDVRATFNK
NGGSPGEPGS VSWMFEQKGL ITVDLSATKR DPDELQLLAI DAGADDVIVD DETLEIYCEW
TQLNAVRQAL LDQGVPISNA EKIMRAKTLI QPDEKDALAA LRLIEKLEDL DDVQKVYSNL
DITTELVERF DS