| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_2549 |
|---|
| Symbol | |
|---|
| ID | 7269395 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | - |
|---|
| Start bp | 3104726 |
|---|
| End bp | 3105838 |
|---|
| Gene Length | 1113 bp |
|---|
| Protein Length | 370 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 643567373 |
|---|
| Product | transposase, IS605 OrfB family |
|---|
| Protein accession | YP_002463854 |
|---|
| Protein GI | 219849421 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0675] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.735833 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTAGAAC TAAAAGCGTA CCAATATCGC CTCACCCCAA CAAAAGGCCA AGTTCGTCTA
CTCGAACAGA CGCTTGAGCT TTGCCGTTGG GTATATAACG AAACGCTAGC CTACCGCAAA
CAGATATGGG AACAACAGCG ACTGCACATT GAGCCAGGCA AAACCAATGC CTTACTTGCG
AGTTGGAAAA CAAGCCATCC CGAACTCAAA CGAATCCACT ACCACGTCTT GCAAGACATT
CAGAAACGAG TACATCGCGC ATGTGAAGCC TTCGTGCGGC GCATCAATCG AGGGCAAAAA
GCGGGATTTC CGCGCTTCAA AGGACGCGGC TGGTATGACA GCTTCACATT CAGGCAAGTG
GGATACAGTC TCAGCATCAA TGGGCAGTGG ATCAACCTTT TCAACATTGG GCGAGTACGG
ATGATCTTAC ATCGCCGCAT CGAAGGTACT ATAAAGACCC TAACAATTCG TCGGACACGA
ACAAGAAAAT GGTATGCATC ATTCGTAGTC GAAACGCAAT CAAAACCATT ACTACCAACC
AACCGCGCAG TTGGCGTTGA TGTTGGATTG CACCAATTTG CCACGCTATC AACCGGAGAA
GTGATCGCCA ATCCACGCTT CTTTCGCAAA GACGAGAAAG CCCTGCGCAA AGCCCAACGT
CGGCTGGCGA AAACCGAGCA AAACACAACC GAACGAGCGA AGCGACAAAA AGTGGTAGCC
CACATTCACG AACGGATCAC AAACCGACGC AAAGACTTTG CCCACAAACT CAGTCGGCGG
CTCGTCAATG AATTCGACGT CATCGTATTC GAGCAACTAC GCATCGCACA GATGATCAAG
GCTCGTCGCC TCGCAAAAAG CATCTCCGAT GCAGCATGGC GACAGCTCAT CACCTACACA
CACTACAAGG CTGCAAGCGC CGGTAGGATG TTTGTAGAAG TTGATCCGCG CGGCACCTCA
CAAAGGTGCA GCCGATGTCG TAGCATCGTC AAAAAAGATC TATCAACGCG ACAGCACCGA
TGTCAAACTT GCGGCTTAGA AATCGACCGT GATCACAATG CTGCGCTAAA TATTTTAGCT
GTGGGACTAC ACAGCTTGGG TAGAAATCCC TAG
|
|---|
| Protein sequence | MVELKAYQYR LTPTKGQVRL LEQTLELCRW VYNETLAYRK QIWEQQRLHI EPGKTNALLA
SWKTSHPELK RIHYHVLQDI QKRVHRACEA FVRRINRGQK AGFPRFKGRG WYDSFTFRQV
GYSLSINGQW INLFNIGRVR MILHRRIEGT IKTLTIRRTR TRKWYASFVV ETQSKPLLPT
NRAVGVDVGL HQFATLSTGE VIANPRFFRK DEKALRKAQR RLAKTEQNTT ERAKRQKVVA
HIHERITNRR KDFAHKLSRR LVNEFDVIVF EQLRIAQMIK ARRLAKSISD AAWRQLITYT
HYKAASAGRM FVEVDPRGTS QRCSRCRSIV KKDLSTRQHR CQTCGLEIDR DHNAALNILA
VGLHSLGRNP
|
|---|
| |