| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_2540 |
|---|
| Symbol | |
|---|
| ID | 7269386 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | + |
|---|
| Start bp | 3097017 |
|---|
| End bp | 3097898 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 643567366 |
|---|
| Product | modification methylase, HemK family |
|---|
| Protein accession | YP_002463847 |
|---|
| Protein GI | 219849414 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2890] Methylase of polypeptide chain release factors |
|---|
| TIGRFAM ID | [TIGR00536] HemK family putative methylases
[TIGR03534] protein-(glutamine-N5) methyltransferase, release factor-specific |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000199798 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGGCG AAACATCACA GCACCAACCG ATGATCATTC AGCAAGCACT TCGTGTGGCT
ACTGCACGCT TACAATCTAT CTCGCCAACG GCCCGCCTCG ATGCCGAACT ACTGTTGGCC
CACATCTTAG GTTGGTCGCG GGCGCGGGTC GTTGCCGAGC GTGAGGTTGT GCTCACTCCG
GCCCAGCAGG AAGCGTTTGG CGCGCTGGTT GAACGACGTG CTGCTCGCGA ACCGGTAGCC
TACCTCATCG GGCATTGGCC ATTTTTTGGT CTCGATTTGG TGGTGGATCG ACGTGTGCTC
ATTCCCCGCC CCGAAACCGA GTTACTGGTC GAATTGGCAC TGACCGAAGC TCGGCGATAC
GCTGACACGC AGATAACGAT TGCCGATATT GGTGTGGGTA GTGGCGCCAT CGCGATTGCA
TTAGCGATCC ATGTGCCGCA CGCGACGGTG TACGGTGTTG ATCGGAGTGC CGATGCGTTG
GCGGTAGCAG CGCGTAATGT TGCCCGCTAC AACCTGAGCG ACCGGGTGGT CTTGTTAGAA
GGTGATCTTC TTACTCCCGT ACCCGGCCCT GTTGACCTTA TCGTAAGTAA TCCACCGTAT
ACCATCTTGG CCGAGGTTGA TGAGAGTGTG TACCGGTACG AGCCACATCT CGCGCTCGAT
GGTGGACCTG ATGGGTTAGA CTGTTATCGC CGGCTGATCG CTGCCGCACC GGCGTATCTC
AAACCGGGTG GGGCAATTTT GCTCGAAATC GGTGCGTGGC AGGCTGAGGC CGTGGCACAC
TTACTTAATC AGGCACTTCC CCATGCTGAG GTGGGGGTGC AACGCGATCT CGCCGGTCGC
GATCGGGTAG TTTGGGCGCG TAATCGAGAT GTCATCCGCT GA
|
|---|
| Protein sequence | MDGETSQHQP MIIQQALRVA TARLQSISPT ARLDAELLLA HILGWSRARV VAEREVVLTP
AQQEAFGALV ERRAAREPVA YLIGHWPFFG LDLVVDRRVL IPRPETELLV ELALTEARRY
ADTQITIADI GVGSGAIAIA LAIHVPHATV YGVDRSADAL AVAARNVARY NLSDRVVLLE
GDLLTPVPGP VDLIVSNPPY TILAEVDESV YRYEPHLALD GGPDGLDCYR RLIAAAPAYL
KPGGAILLEI GAWQAEAVAH LLNQALPHAE VGVQRDLAGR DRVVWARNRD VIR
|
|---|
| |