Gene Cagg_2521 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2521 
SymbolrpsO 
ID7269367 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3069374 
End bp3069643 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content52% 
IMG OID643567347 
Product30S ribosomal protein S15 
Protein accessionYP_002463828 
Protein GI219849395 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0184] Ribosomal protein S15P/S13E 
TIGRFAM ID[TIGR00952] ribosomal protein S15, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.846935 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGCTTG AGAAAGAAGA AAAATCACAG ATCATCAACA ATTATCAACT GCACGAGACA 
GATACGGGTT CGCCTGAAGT ACAGGTTGCT CTCTTGACCG AGCGCATTAA CCAGCTTATC
GAGCATCTAC GTGTCCACAT CCACGATCAC CACTCACGGC GTGGGTTGCT CAAACTCGTC
GGGCGACGAC GACGGCTGCT CAATTATCTC CAGTCTAAGG ATCGCGAGCG TTACCGCAAG
GTGATTAATA GCCTCGGTCT GCGCCGTTAG
 
Protein sequence
MALEKEEKSQ IINNYQLHET DTGSPEVQVA LLTERINQLI EHLRVHIHDH HSRRGLLKLV 
GRRRRLLNYL QSKDRERYRK VINSLGLRR