Gene Cagg_2502 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2502 
Symbol 
ID7269348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3047252 
End bp3048451 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content58% 
IMG OID643567328 
Productaminotransferase class V 
Protein accessionYP_002463809 
Protein GI219849376 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0520] Selenocysteine lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.207929 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGCA CAACCCTCTC ACTACCGTTA CCCACACTTG CCGAGCAATT TTTACTCCGC 
CGCGACATAA CCTTCCTCAA CCACGGCAGC TTTGGTGCTT GTCCACGCCC GGTATTTACC
GTCTATCAAG CATGGCAACG TCAGCTCGAA GCCCAACCGG TCGCGTTTCT CGGTCGTGAA
TTATCGGCAC GGCTCCACAA CGCCCGCACC CGCCTGGCCG CTTTCGTCGG CGCATCGGCA
GATGAACTCG TCTTCGTCCC CAACGTGACG TATGCCCTGA ATATTGTTGC CCGCTCGATT
GATCTGCAAC CGGGTGATGA AGTATTGGGG ACGACCCACG AGTACGGCGC GATTGAGCGC
ACCTGGCGGT ATGTATGTCG CCAACGAGGC GCAACCTATG TCAACCAACC GGTTAAGCTA
CCGGTAGCGA CACCTACCGA GATAATCGAC CAGCTTTGGA GCGGGGTTAC CCCTCGCACC
CGTGTCATCT TGCTCAGCCA CATCACATCG CCAACCGCAC TAATCATGCC GGTGGCCGAG
ATTTGCCGGC GTGCCCGCGC TGCCGGGATC ATCACGGTAA TTGACGGTGC CCATGCCCCC
GGTCAGATCG ATCTCAACCT CACCGAGTTG GGGGCTGATT TTTACGGTGC GAACTGCCAC
AAATGGCTGT GCGCACCTAA AGGAGCCGGT TTTCTCTACG TCCGTCCCGA ACACCAAACC
CGCTTAGAAC CGCTGGTCGT GAGCTGGGGC TGGCAACCGC CGGAACCACT GCAAGGCAGC
TTTCTCGCCT ACCCGACAGG CCGTCCATTA CAAGCCTACT ACGAATGGAT GGGAACCGAC
GATCCATCGG CTTTTCTCAG CGTACCTGCT GCCATTGATT TTCAACAGAC ACACCACTGG
CCGGCAGTAC GAAACGCCTG TCACACCTTG TTACGCGAGG CATCAACACA GATACTGGAA
CTCAGCGGTT TACCACCGCT TTCTCCCGCC GACGAACAAT GGTGGGGACA GATGCGGGCA
CTACCGTTGC CACCGTGCGA TCCGACCCAG GTACAGGCTC GGCTCTGGCA CGAATGGCGG
GTAGAAGTAC CATGTTTCAT GTGGGAAGGA CAACCACTCA TCCGTGTCTC GGTACAGGCG
TACAATTCAC CGACAGATAT TGACCGGCTC CTCAGCGGGC TACGAGCGAT TATGTCATAA
 
Protein sequence
MTGTTLSLPL PTLAEQFLLR RDITFLNHGS FGACPRPVFT VYQAWQRQLE AQPVAFLGRE 
LSARLHNART RLAAFVGASA DELVFVPNVT YALNIVARSI DLQPGDEVLG TTHEYGAIER
TWRYVCRQRG ATYVNQPVKL PVATPTEIID QLWSGVTPRT RVILLSHITS PTALIMPVAE
ICRRARAAGI ITVIDGAHAP GQIDLNLTEL GADFYGANCH KWLCAPKGAG FLYVRPEHQT
RLEPLVVSWG WQPPEPLQGS FLAYPTGRPL QAYYEWMGTD DPSAFLSVPA AIDFQQTHHW
PAVRNACHTL LREASTQILE LSGLPPLSPA DEQWWGQMRA LPLPPCDPTQ VQARLWHEWR
VEVPCFMWEG QPLIRVSVQA YNSPTDIDRL LSGLRAIMS