Gene Cagg_2480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2480 
Symbol 
ID7269326 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3015735 
End bp3016256 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content57% 
IMG OID643567307 
ProductNADH dehydrogenase (ubiquinone) 24 kDa subunit 
Protein accessionYP_002463788 
Protein GI219849355 
COG category[C] Energy production and conversion 
COG ID[COG1905] NADH:ubiquinone oxidoreductase 24 kD subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.907179 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.905629 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACAC CTGCACCGAA GGCCGATGTT GACCGTGAAA TGCGCCCTGC CGGCGATAAC 
CGCCGCAAGA TCCTTGAGGC GACGATGAAG CGTTTCCAGT ACCAGGGAAA CGCATTGATC
GAAGTTCTGC ACAAAGCCCA GGAACTCTAC GGTTTTCTGT CACCAGAATT ACTCAGCGAG
ATAGCCCAAC GTCTCCATTT GCCGCCAAGC CGAGTATACG GTGTCGCAAC CTTCTATCAT
TTCTTTTCCT TGGCCCCTCA AGGTCGACAT AGCTGCACCG TCTGTCTTGG CACTGCCTGC
TACGTGCGCG GCGCTGCCAT CTTGCTGCGC GAACTCGAAA CACTAAGCGG GATCAAGGCA
GGCCACACCA GCCCTGATGG GCAGTTATCC TTACTTACTG CGCGCTGCCT CGGCGCATGT
GGCATTGCAC CGGCAGTCGT CCTCGATGGT GAAGTTATCG GGCACGCCGA CCGCTCAGAT
CTGACAACAC GGATTCGGTC GTTGCTTGGC CGTGAGGAGT AG
 
Protein sequence
MTTPAPKADV DREMRPAGDN RRKILEATMK RFQYQGNALI EVLHKAQELY GFLSPELLSE 
IAQRLHLPPS RVYGVATFYH FFSLAPQGRH SCTVCLGTAC YVRGAAILLR ELETLSGIKA
GHTSPDGQLS LLTARCLGAC GIAPAVVLDG EVIGHADRSD LTTRIRSLLG REE