Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_2439 |
Symbol | |
ID | 7266162 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | + |
Start bp | 2959503 |
End bp | 2960345 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643567265 |
Product | ABC transporter related |
Protein accession | YP_002463748 |
Protein GI | 219849315 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.110449 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCCGC TCCCCTCTAG AAGGAGTTTT TCCGTGACGA CAGAGTATCT TGGCCGTCTG ATGGTTGAAC TGCGTCAGAT CCGCAAGACG TTCCCTACCG GTGATGGTGA ATTGATTGCA CTTGACGATA TTAGCCTGAC GATAGAAGAG GGTGAGATGG TTGCCATCAT GGGGCCGTCG GGTAGCGGGA AAAGCACCCT CATGACCTTA CTCGGCTTGC TCGACACTCC TACGTCTGGT GAATACATTC TCGATGGGAT CGATGTCTCG CGGCTGAATC GGCAGGAACA GGCGCGTATT CGCAATCGCA AGCTGGGGTT CGTCTTCCAG AACTTCAACC TCTTGCCACG CCTGACTGCG CAAAAGAACG TTGAGTTACC GCTTGTCTAT GGGCGGGTCG GTGCGCGTGA GCGGGCCGAA CGAGCACGGG CCGCGCTCGA GGCGGTCGGT CTTGGCCACA AACTCAACAG TCTGCCGAAT ACGTTGTCGG GTGGGCAGAA GCAACGGGTC GCAATTGCCC GCGCGCTCGT TCACGATCCG GCGATTATTC TGGCCGACGA ACCAACCGGT GCTCTCGACA CGCGCACCGG AGCCGAGATT CTGGCGCTGT TCCGGGAATT GAACCGCGAT CAGGGACGCA CCATCGTGAT TGTCACCCAC GATCCCGAAA TTGGTCGGCA TATGGATCGG GTGATCGGCT TGCGCGACGG GCGGCTGGTT GACAACATCC TGAGCGAGTA CTACGGCGTT GAGGTGTTGG AAGAGGTCGA GCGTACCCGC GGTCTTGAGC CGGTGCCGGT GCCGGTTGTG TGCCGTCCGC CGACCGATAC CACCACGCCA TAA
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Protein sequence | MNPLPSRRSF SVTTEYLGRL MVELRQIRKT FPTGDGELIA LDDISLTIEE GEMVAIMGPS GSGKSTLMTL LGLLDTPTSG EYILDGIDVS RLNRQEQARI RNRKLGFVFQ NFNLLPRLTA QKNVELPLVY GRVGARERAE RARAALEAVG LGHKLNSLPN TLSGGQKQRV AIARALVHDP AIILADEPTG ALDTRTGAEI LALFRELNRD QGRTIVIVTH DPEIGRHMDR VIGLRDGRLV DNILSEYYGV EVLEEVERTR GLEPVPVPVV CRPPTDTTTP
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