| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_2438 |
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| Symbol | |
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| ID | 7266161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chloroflexus aggregans DSM 9485 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011831 |
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| Strand | + |
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| Start bp | 2957711 |
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| End bp | 2959471 |
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| Gene Length | 1761 bp |
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| Protein Length | 586 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643567264 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_002463747 |
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| Protein GI | 219849314 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0017106 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACTC TTCCCCAATC ACGTTCCCGT TTACGAATCC CTCGTCTATC GTTACCGATG
TGGATCGCCG CCGGCTTGTT GCTGGCGGTA GTTGTGACCT TGATCGTGCG GTTGACAACA
GCTTCCAGTA CCGATCCATT GGCCAATCTG ACCTTTGCTA CGGTAACTCG TGGTGATCTG
CGTTTGACCG TAAATGCTAC CGGTTCGGTT GAGCCAAACC AGACGGCCAC GTTAAGCGTT
TCCATTCCCG GTCGGGTACA GGAGGTGCTG GTGACGGTCG GGCAGACGGT TGCCGCCGGT
GATCCGTTGC TACGACTCGA TGATCGTCAG TTACGGGCCG ATGTAGCTGC GGCGGAGGCG
GCAGTTGCGC TGGCCCAAGC CGATGTCCAG GCTTTGCGTG AGCGGGCTAC ACCCGAACAG
CGGGCTGAAG CCGAGGCGCT GGTGGTGGCG GCGCAGGCTA CGTTAGCCCA GACGCAGACG
AATGTGACGC CGGCCGACAT CGCGGCAGCA CGTGCGGCGG TGGTAGAGGC ACAAGAACGG
CTACAGAAGT TGTTGGCCGG GCCGACGAAC GAACAGCGGG TGCGGGCGGA GACGGCGCTG
ACGCAGGCGA AGGCCGAACT TGAACGCCAA CGCGAGCTGT TGTCCGCAGC GAAGGCTGAG
GCACAGGCGC GGGTTGAAGC ACAGGCTAAT GTGGTGCGCA ACGCGCAAAG CGCCTACAGC
GATGCGTATT GGAATTGGGA ACATGTGAAG GCGAACGGCA CCGATCCGCG TACCGGTCGT
TCACTCAACG ACATCGAGCA ACGTGAGTAT CAGCGTGCGT TTGAGCGGGC TGAGCGAGCG
TTGGCCGACG CTGAGGCAGC ACTGGCCCAG TCCCAGATCG CTTACCAGAC CGCAGTCCAG
AACGAGATGA GCGGATTAGC GGCTGCCGAG GCACGAGTTG CCAGTGCGCA AGCCGATCTT
GATGCGTTGC TGAGTGGCCC GACCACCGAT GCTGTTGCGT CGGCCCGTGC TCAGTTGGCA
CGTGCCGAAG CCGAATTAGC CCGTTTGACC GGGGCTGCCC GTCAGAACAC CATTGCTGCG
CAGCAGGCGC AGCTCGAAGC GGCGCAAGCA CGTCTGGCCC AACTCTCTGC CGATCCGCGT
GCCAGCGATG TTGCCCGCGC TGAAGCACGC TTAGCTCAGG CGCAGGCGCA GCTTGAAGCG
GCGCGGATTC GGCTCGATGA AGCGACGTTG CGGGCACCGT TTGCCGGGGT GATCGCGGCC
GTTAATGTTA CGCCTGGTGA AACAGTGGGC AGTCAAGCGC CAATCGTGTT GATCGACGTG
AGTCGCTATC TGGTCAAGGT GACGGTTGAT GAGGTTGATA TTGCGCGGGT AGCCATCGGT
CAGCCGGTTG AGATTACGGT TGATGCACTC AATGCGCCAC CGTTTACCGG TGAAGTGGTG
AATGTCGAAC CGTTGCCCAC CGGTACGAAT GGTGTGACGG CGTATCGGGT CACCCTCGCC
TTTAACCCGT CGGGTCAACC GGTACGGCCC GGCATGACTA CAACGGCGGC GATTATCGCG
GCCACGCGCA GTAATGTGTT GCAAATCCCG GTCGCTGCGG TGAAGAATGT TGGCGCGAAG
ACGACCGTTG AGGTGGTCAC TGTTGACGAA AACGGCCAAC GTCAGCTCAG TGAGCGAGCC
GTGTTGGTTG GCTTGCGGGC CAACGGGATG GTCGAAATTC AGAGCGGTTT GGCCGAGGGT
GAGCAGGTTG TCGTGCGATA A
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| Protein sequence | MSTLPQSRSR LRIPRLSLPM WIAAGLLLAV VVTLIVRLTT ASSTDPLANL TFATVTRGDL
RLTVNATGSV EPNQTATLSV SIPGRVQEVL VTVGQTVAAG DPLLRLDDRQ LRADVAAAEA
AVALAQADVQ ALRERATPEQ RAEAEALVVA AQATLAQTQT NVTPADIAAA RAAVVEAQER
LQKLLAGPTN EQRVRAETAL TQAKAELERQ RELLSAAKAE AQARVEAQAN VVRNAQSAYS
DAYWNWEHVK ANGTDPRTGR SLNDIEQREY QRAFERAERA LADAEAALAQ SQIAYQTAVQ
NEMSGLAAAE ARVASAQADL DALLSGPTTD AVASARAQLA RAEAELARLT GAARQNTIAA
QQAQLEAAQA RLAQLSADPR ASDVARAEAR LAQAQAQLEA ARIRLDEATL RAPFAGVIAA
VNVTPGETVG SQAPIVLIDV SRYLVKVTVD EVDIARVAIG QPVEITVDAL NAPPFTGEVV
NVEPLPTGTN GVTAYRVTLA FNPSGQPVRP GMTTTAAIIA ATRSNVLQIP VAAVKNVGAK
TTVEVVTVDE NGQRQLSERA VLVGLRANGM VEIQSGLAEG EQVVVR
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