| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_2425 |
|---|
| Symbol | |
|---|
| ID | 7266148 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | + |
|---|
| Start bp | 2943735 |
|---|
| End bp | 2944616 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 643567251 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_002463734 |
|---|
| Protein GI | 219849301 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCGGT TTATCCAACT AGCTCTGAGC GGGATTGCTA ACGGTGCGAT CTTTGCCCTG
GTGGCGCTGG GTTTCGTCCT GATTTACAAA AGTAGCGATG TGATCAATTT TGCCCAAGGG
GAGCTACTGC TGATCGGCGC ATATCTCACC TATGCGATGG TCGAGCAGTT TGGCTTGTGG
TGGCCGATAG GTGTTGTGGT CGCAGTGGTG CTGGCGGCAG TGGTAGGGGT GTTGATCGAG
CAATTGGTGC TGCGTCCGCT CATCGGCGAA CCGGTGATCT CGGTCATTAT GGTCACGATA
GGCCTCTCAT CACTGCTCAG AGCGATCGTC GGTGCGATCT GGGGCGTAAC GCCGCGCCCG
GCCCCGCAGT TTCTGCCAAC CGATACGGTG ACGATCCTTG GGGCCAATGT CGGCGTTGAC
CGGCTCTGGG CCTTTGCATT GGCGATCATC TTCTTCGTGA TACTCACGCT CTTCTTCCGC
TTCAGCCGCG AAGGTATTGC GATGCGAGCA GTAGCCGATG ATCAGCAAGC GGCGCTCAGC
ATGGGTATTA GCGTGAAGAA GGTGTGGGCG GTCGCGTGGG CGATTGCAGC GATCACTGCT
GCGGTTGGCG GTATTCTGCT GATGAGCATT TTCGGTGGCG TTTCGGGTAC GATTGGTCGT
GTTGGTTTGC TCGTGTTCCC GGTGGTGATT TTGGGTGGCC TCGACAGCAT TCCCGGTGCA
ATCATCGGTG GTTTGATCAT CGGATTGCTG CAATCGTTTG CCGGTGGTTT GCTTCCGCCG
GAATGGGGAT TGGGTGAGGT GGCACCGTTT GTGATTTTGT TGATCATTCT GCTGGTACGG
CCATATGGTC TGTTTGGTCA GCGCATCATC GAGCGGGTGT AG
|
|---|
| Protein sequence | MDRFIQLALS GIANGAIFAL VALGFVLIYK SSDVINFAQG ELLLIGAYLT YAMVEQFGLW
WPIGVVVAVV LAAVVGVLIE QLVLRPLIGE PVISVIMVTI GLSSLLRAIV GAIWGVTPRP
APQFLPTDTV TILGANVGVD RLWAFALAII FFVILTLFFR FSREGIAMRA VADDQQAALS
MGISVKKVWA VAWAIAAITA AVGGILLMSI FGGVSGTIGR VGLLVFPVVI LGGLDSIPGA
IIGGLIIGLL QSFAGGLLPP EWGLGEVAPF VILLIILLVR PYGLFGQRII ERV
|
|---|
| |