Gene Cagg_2424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2424 
Symbol 
ID7266147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2941741 
End bp2943690 
Gene Length1950 bp 
Protein Length649 aa 
Translation table11 
GC content55% 
IMG OID643567250 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_002463733 
Protein GI219849300 
COG category[I] Lipid transport and metabolism 
COG ID[COG1022] Long-chain acyl-CoA synthetases (AMP-forming) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATACAGA TACCTGAGAC GACAATCCCG CGCTTGCTGT TTCAAAATGC AGAACGCTTT 
GGTGATAAGG TAGCCCTACG GGAAAAAGAC TTCGGGATTT GGCAGACGGT GACGTGGCGT
CAGTTTGCCG AACACGTGCG TGCGTTTGCC ATGGGGCTGC ATGCGCTTGG GGTGCGACGC
GGTGATGTCG TCGCGATTAT CGGCGATAAC CGACCGGAAT GGCTCTACGC CGAATTTGCC
GCTCAAGCGA TCGGTGCGAT GTCGATTGGG GTGTACCAGG ATTCGGTAGC CGAAGAGGTC
TATTACGTCG TTTCGGCGGC TGAAGCGCGG GTCATCGTGG TCGAAGATCA GGAACAGGTT
GATAAGGTCA TTGAGATCTG GCCACGACTC AGCGGTGTCC TCAAAGTGAT TTACTACGAG
TCGAAGGGTA TGCGCAATTA TCGCCAGCCC TATTTGGCGC ACTTCCCCGA CATCGAAGAG
CTAGGGCGGG CCTACGACCG TGAGCACCCC GGTTTGTTTG ACGCCGAACT TGCCGCCGGC
AAACCCGATG ATGTTGCGAT CCTCTCGACC ACTTCCGGCA CGACCGGGAA GCCGAAACTG
GCGATGCTGA CCCACCGTAA TCTGATCAGT CAGGGTGCCG GGTTGTTGTC AGTTGACCCG
CTCGGTCCTG ATGACGAATT TGTGAGCTTT TTGCCGTTGG CGTGGGTCGG TGAGCAGATG
GTGACGGTAG CTGCCGGTAT GCAGTGCGGT TTTACGATCA ACTTCCCCGA ATCGGCAAGT
ACTGTGCAAG AGAATATTCG CGAGATCGGG CCACGGGTGA TGTTTTCACC GCCACGGATC
TGGGAGAACA TGCTCTCGCA GGTACAAGTG AAGATTCAAG ACTCGACACC GTTGAAGCGC
GCAATCTTTG AGTGGGCAAT GAAGCAAGGG TATGCGATGG CGGATGCCCG CTTCAGTGGC
CAACGACCGA GTCTTGGTTT GCGGCTCCGG TATGGTTTGG CGCGGTTGTT GGTCTTCGAG
ATGCTGAAAG ATCATCTCGG TTTGCGGTTT CTCAAACGGG CCTATACCGG TGGTGCTGCC
CTTGGCCCTG ATGTGTTCCG CTTTTACCAC GCGATTGGGG TGAATCTCAA ACAGGTCTAC
GGCCAGACCG AAAGTGCCGG TTTGAGCGTG ATCCACCGCG ACGGTCAGAT TAAATTTCAG
ACCGTTGGGA CGCCGTTGCC GAACACCGAG ATTCGGATTG CCGAAAACGG TGAGATTTTG
GTGAAGAGTC CGTCGGTCTT TGTCGGCTAC TACAAGAACC CCGAGGCGAC GGCTGAGGCA
CTGGAAGACG GCTGGCTGCA CAGCGGCGAT GCCGGTTATT TCGATGAAGA TGGTCACTTG
ATCGTCATCG ACCGGGCGAA AGATGTTATG ACTCTGCACG ACGGAACCAA ATTCTCGCCC
CAATTTATCG AAAACAAGCT CAAGTTTAGC CCCTATATCA AAGAGGCAGT CGTCTTTGGT
GGTGATTGGC CGTTTGTCAC CGCAATGATC AATATTGATT TCGCAAATGT CGGTAAGTGG
GCAGAAAATG CCCAGATATC GTACACCACC TACACCGACC TCGCCCAAAA GCCACAGGTC
TATGCTCTGA TCCGCAAAGA TGTCGAGCGT GCCAATGCCG ATCTACCGCC GGCGGCGCGT
ATTCGGCGTT TTCTGTTGCT TCACAAGGAG CTTGATGCCG ATGACGGTGA GCTGACTCGG
ACCCGCAAAG TGCGTCGTCG TCTCATTGCA CAACGCTACC AGGAGATCGT CGATGCTCTG
TACGGTGATC AAAGTGAGTT TGAGATCGAA ACGACGATTA CCTATCAAGA TGGGCGTACA
GCCTTGATCA AGACGCGCTT GCGGATTGAG GAGTTAGCCG ACCCATCGGC GCCGGCGCCA
GCGCCGGCAG CGCGGGCGGT CGCTCGTTGA
 
Protein sequence
MIQIPETTIP RLLFQNAERF GDKVALREKD FGIWQTVTWR QFAEHVRAFA MGLHALGVRR 
GDVVAIIGDN RPEWLYAEFA AQAIGAMSIG VYQDSVAEEV YYVVSAAEAR VIVVEDQEQV
DKVIEIWPRL SGVLKVIYYE SKGMRNYRQP YLAHFPDIEE LGRAYDREHP GLFDAELAAG
KPDDVAILST TSGTTGKPKL AMLTHRNLIS QGAGLLSVDP LGPDDEFVSF LPLAWVGEQM
VTVAAGMQCG FTINFPESAS TVQENIREIG PRVMFSPPRI WENMLSQVQV KIQDSTPLKR
AIFEWAMKQG YAMADARFSG QRPSLGLRLR YGLARLLVFE MLKDHLGLRF LKRAYTGGAA
LGPDVFRFYH AIGVNLKQVY GQTESAGLSV IHRDGQIKFQ TVGTPLPNTE IRIAENGEIL
VKSPSVFVGY YKNPEATAEA LEDGWLHSGD AGYFDEDGHL IVIDRAKDVM TLHDGTKFSP
QFIENKLKFS PYIKEAVVFG GDWPFVTAMI NIDFANVGKW AENAQISYTT YTDLAQKPQV
YALIRKDVER ANADLPPAAR IRRFLLLHKE LDADDGELTR TRKVRRRLIA QRYQEIVDAL
YGDQSEFEIE TTITYQDGRT ALIKTRLRIE ELADPSAPAP APAARAVAR