Gene Cagg_2388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2388 
Symbol 
ID7268740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2905100 
End bp2905516 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content54% 
IMG OID643567215 
Productsingle-strand binding protein 
Protein accessionYP_002463698 
Protein GI219849265 
COG category[L] Replication, recombination and repair 
COG ID[COG0629] Single-stranded DNA-binding protein 
TIGRFAM ID[TIGR00621] single stranded DNA-binding protein (ssb) 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.875154 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGAG ACTTAAATAA GGTATCGATC ATTGGTCGCC TTGGCGCCGA CCCAGAATTT 
CGTTATACCG CCGCCGGCAC CCCGGTCGCC ACATTTCGGG TAGCTACCAG CCGCCAGTGG
CGAGATCCGA ATGGTCATCT GCACGAGGAA ACCGAATGGT TTCACGTTGT GGCTTGGAAT
CGATTAGCCG AAATCTGTCA TCAATACCTT AGTCGTGGAG CGCGGGTTTA TATCGAAGGT
CGCTTGCAAA CACGCACATG GGAAGACGCT CAGAGTGGAC AACAACGCTC ACGAGTCGAA
GTCATCGCCC AAGATATGAT CTTGCTCGAA TCGCGTGAGT CGCGATCTGA CGATCCACCA
CGCCCACCAC GCCGTGAACC ACCACCAGAT ATCGGTGATG ATGATATTCC GTTTTAG
 
Protein sequence
MARDLNKVSI IGRLGADPEF RYTAAGTPVA TFRVATSRQW RDPNGHLHEE TEWFHVVAWN 
RLAEICHQYL SRGARVYIEG RLQTRTWEDA QSGQQRSRVE VIAQDMILLE SRESRSDDPP
RPPRREPPPD IGDDDIPF