Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_2385 |
Symbol | |
ID | 7268737 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | - |
Start bp | 2900519 |
End bp | 2902303 |
Gene Length | 1785 bp |
Protein Length | 594 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643567212 |
Product | extracellular solute-binding protein family 5 |
Protein accession | YP_002463695 |
Protein GI | 219849262 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTTCA CGCGCTGGCG TCACTCACTC GCGCTCACGC TGCTGTTTGG GTTATTGTTA CCCATCCTGG CAGCATGTAC CGGCGGTTCG ACACCGAGCG CCGAGCCAAC CAGTGCTCCC GCCGCACAAC CCACCACAGC CCCTGCCGCA CAACCCACCA CAGCCCCTGC TGAACAACCA ACAGCGGCGC CGGTTAGCGG TACAGCGCAA CCGGGAGTGC TACGACTGGT GACCGGTTCT GAACCAGATA ACATCGATCC ACAGAAGGCC AGCTTTGTCA ACGAGATCCA GTTCATTATG ATGGCCTATC AGGCCCTAAT GACGTTTGAT CTCGATATGA ACCCGATTCC GGGCGCTGCC GAAAAAGTCG ATGTTTCGGC GGATGGAACC GTCTACACCT TCACTCTGCG CCGCGACGCC AAGTACAGCG ACGGCACGCC GGTCACTGCC CGTAATTTCG AGTATGCGTG GAAGCGGCTG GCCGATCCGG AAACGGCAGG TGAATATCAG TCGCTGCCCT GTGGCATTAT CAAAGGCTAC AGCGAATACA GCGCTGCTGC CTGCCAAGGC TTGTCGATGG AAGAGGTGAT GAAGCTCGAT CTTGAGAAGC TCCGCAACGA CTTCGGTGTC AAAGCACTCG ACGATTACAC GCTCCAGATC GAGCTGGTCG CGCCAGCACC CTATTTCCTC AGCATGGCTG CGCTCTGGAT CGGCGTCCCA GTACGCGAAG AGGATGTGGC AAAGGGTGAG GACTGGTGGT ACTACCCCGA AAACTATATC GGGAATGGTC CCTTTGTTCT GAAAGAGTGG GAACACGACA GCAAAGCGAT CTGGGAACCG AATCCCAACT ACGTCGGACC ACTGGGGCCG GTCAAACTTA AGCGAGTCGA GTATTACATG ATCACCGATG GTCAGGTGGC GTTCCAAGCT TACCAGAACG GTGAGATTGA CATGCTCGGC GTCGGTGCCG AAGATCTTGC GACCGTCAAG TCCGATCCGG TTCTGAGCCA GCAAACAATT GACGTTCCCG GCTCCTGCAC CTTCTACTTC GGCTTCAATC TCGCCAAGCC GCCGTTCGAC AACAAGCTGG TGCGGCAAGC TTTTGCCCAA GCCCTCGACC GAGAAGCTTA CGTGCGTGAT GTCTTCCAAG GCTTGGGAAC CCCCACCTAC AGCTTTATCC CGCCCGGCTT CCCCGGCTAC CAGCCTGACT TGAAGCTGTG GGAGTTCAAC CCTGAAAAGG CGAAACAGAC ATTGGCCGAG GCCGGGTATC CGAACGGTGA AGGGCTACCG GAAATCAAGC TGACCTATTC GGGTACGGCC CGCAACAATG CCCGGTTTGA GTGGGTGGCG AACCAGTTTA AGCAGAACCT TGGTATCGAT GTGATCCTTG ATCCAATCGA TCCTACAGCT TTTGCTGCGG CCACTAAGGA TAACCCGCCA CAAATGTTCT CGCTTGGCTG GTGTGCCGAC TACCCCGATC CACAGAACTG GATCTCGCTC TTCCAGACCA ACGGTCTGCT CAGCGCTCGC GTCAACTACT CGAACCCGCA ACTCGATGAG TTGATACGAC AGGCAGACGT TGAGCAAGAT CCGGTCCGTC GTGCCGAACT CTACGCCCAA GCGCAGAAGA TACTGGTAGA AGATGCACCG GTTGTCTTCA TGCTGAACAA TGGCGGTCCG GTATTAGTGA AGCCGTATGT TAAGGGGGTA ACACCGGATA CGATCACCCC ACTCGACTAC TGGCTCGGCT TCTTCAACCT ACCGAACGTT GATGTTCAGC CTTAG
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Protein sequence | MNFTRWRHSL ALTLLFGLLL PILAACTGGS TPSAEPTSAP AAQPTTAPAA QPTTAPAEQP TAAPVSGTAQ PGVLRLVTGS EPDNIDPQKA SFVNEIQFIM MAYQALMTFD LDMNPIPGAA EKVDVSADGT VYTFTLRRDA KYSDGTPVTA RNFEYAWKRL ADPETAGEYQ SLPCGIIKGY SEYSAAACQG LSMEEVMKLD LEKLRNDFGV KALDDYTLQI ELVAPAPYFL SMAALWIGVP VREEDVAKGE DWWYYPENYI GNGPFVLKEW EHDSKAIWEP NPNYVGPLGP VKLKRVEYYM ITDGQVAFQA YQNGEIDMLG VGAEDLATVK SDPVLSQQTI DVPGSCTFYF GFNLAKPPFD NKLVRQAFAQ ALDREAYVRD VFQGLGTPTY SFIPPGFPGY QPDLKLWEFN PEKAKQTLAE AGYPNGEGLP EIKLTYSGTA RNNARFEWVA NQFKQNLGID VILDPIDPTA FAAATKDNPP QMFSLGWCAD YPDPQNWISL FQTNGLLSAR VNYSNPQLDE LIRQADVEQD PVRRAELYAQ AQKILVEDAP VVFMLNNGGP VLVKPYVKGV TPDTITPLDY WLGFFNLPNV DVQP
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