Gene Cagg_2365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2365 
Symbol 
ID7268715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2874815 
End bp2875831 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content56% 
IMG OID643567194 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_002463679 
Protein GI219849246 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.115358 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0275961 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTACCG AGTCTCGTGT TGTAGCGGGC GCGGCGCGCC CAACCGGCCG ACGTGGCACA 
GAACTGCTAC GTGTGGAGGG TTTGAAGACC TATTTCTTTA CCGAAGAGGG TGTGGTGCAG
GCGGTCGATG GTGTCGATTT TGTCTTGCGT CGCGGCGAAA CCCTCGGTAT TGTCGGCGAG
TCGGGATCGG GCAAGAGTGT GACCTCACTC TCGATTATGC GGTTGGTGAG TCCGCCCGGT
CGGATCGTCG AAGGAAAGAT CATTTTCGAT GGGATTGATC TGCTGACGCT TGAGCCGGAA
GAGATGCGGA AGTTGCGCGG TGATCGGATT GCTATGATCT TTCAACAACC GACGACAGCG
CTGAATCCGG TCTTCCGCAT CGGCGATCAG ATTATCGAGA CGCTGGAAAT ACATCAGGGC
CTGAAAGGCG AAGAGGCGCA AAAGCGCTGT ATCGAACTCC TTTCGATGGT TGGCTTGCCC
GATCCACAGC GGCGGATGCG TCAGTATCCG CATGAATTGT CCGGGGGTCA GTGCCAACGG
GTGATGATCG CGATGGCATT GGCCTGTAAC CCTGAATTGT TGATCGCCGA TGAGCCGACA
ACGGCGCTCG ATGTGACTAT TCAAGCCCAG ATTCTCGACC TCATGCGTGA GTTGCGCGAG
AAGATCGAGA CGGCTATTAT GTTGATCACC CACGATATGG GGGTGATTGC CGAAATGGCC
GATAGTGTGG TGGTGATGTA CGCCGGCCAG GTAGTCGAGT ATGCCGATGT GCAGTCGCTG
TTTAGCGATC CGAAGCATCC GTATACTCGT GGCTTGCTGA ATTCGATGCC GGTGCTTGGC
GATGAACGTG AGGAACTCGA GGTGATTCCC GGGACGGTGC CGAGCCTGAT CAATCCTCCG
CAAGGTTGTC GCTTTGCGTC ACGGTGTAGC AAGCGCTTCG AGAAGTGTGA TCAGCCACCA
CCAATGATCG AGCTGGGATC GAATCGACGG GTGCGCTGTT GGTTGTATGC AGATTGA
 
Protein sequence
MATESRVVAG AARPTGRRGT ELLRVEGLKT YFFTEEGVVQ AVDGVDFVLR RGETLGIVGE 
SGSGKSVTSL SIMRLVSPPG RIVEGKIIFD GIDLLTLEPE EMRKLRGDRI AMIFQQPTTA
LNPVFRIGDQ IIETLEIHQG LKGEEAQKRC IELLSMVGLP DPQRRMRQYP HELSGGQCQR
VMIAMALACN PELLIADEPT TALDVTIQAQ ILDLMRELRE KIETAIMLIT HDMGVIAEMA
DSVVVMYAGQ VVEYADVQSL FSDPKHPYTR GLLNSMPVLG DEREELEVIP GTVPSLINPP
QGCRFASRCS KRFEKCDQPP PMIELGSNRR VRCWLYAD