Gene Cagg_2344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2344 
Symbol 
ID7268694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2852676 
End bp2853611 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content53% 
IMG OID643567173 
Productpentapeptide repeat protein 
Protein accessionYP_002463658 
Protein GI219849225 
COG category[S] Function unknown 
COG ID[COG1357] Uncharacterized low-complexity proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00177045 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGCCGATT TGACACCTGA TCAGATCTAC GATTTACTCA ACCGGCCTGG CCCACTGTGG 
TTAGTGGGGG CAAATCTCAG TGGGGCGAAC CTGAGTGCCG CAAACCTCAG CGGGGCGAAT
CTCAGTGAAG CCAAATTGAG TCGTGCGCGG CTGACCGACG CCAATCTCTA CCGAGCCGAT
CTGAGTATTT GTGAGTTGGG TGAAGCAAAT CTGAGCTGGG CAAATCTCCG TGAAGCGAAA
CTCAATTGGG CGCAGTTAGT GCGGGCCGAT TTGAGCGATG CCGATTTACG CAAAGCCGAC
CTGAGCTGGG CCAATCTTGA GTTTGCAACG CTGATTGGGG CCAACCTACG TGGCGCCAAT
CTGAGTGCGG CTGATTTCAG TGGTGCGAAT CTGTATGGCG CAAATTTAAG CCTCTGTAAC
TTAAGTGGGG CCGATCTGCG TGATACGGTG ATGATCGGTG CCAATCTGAG CGAAGCCCAA
CTACGTGAAG CGCAATTGGT TAACCTGAGT GGAGCGAACT TGAGTGGGGC GATCTTGCTT
CGCGTCAGTT TAAACGGAGC AAACCTCAAC GGCGCGAATT TGGCCGGGGC TAACTTGATG
CACGCTAATC TACGTGAGGC GACGCTCGAT GAGGTGAATT GTATCGGGGC AAATTTGAGT
GAGACAAACC TTAGTGAGGC AAGTTTGTGC AATGCCGATT TTAGTGATGC TAACCTGAGT
GGGATTTATC TCAGTGGGGC ACATTTACGT AACGCTATCT TCACGCGCGC GAATTTGTCG
CGGGCTAACT TGAGCGGTGC CAATTTACGT GGTGCGAATC TTCGTGGGGT GAATCTCCGT
GAGGCGAGTT TGGCCGATGC CGATTTGACC GACGCCGACT TGACCGACGC CGACTTAACC
GATTGTGATC TGAGCGGTGC GAAGGGGTTA CGATAG
 
Protein sequence
MADLTPDQIY DLLNRPGPLW LVGANLSGAN LSAANLSGAN LSEAKLSRAR LTDANLYRAD 
LSICELGEAN LSWANLREAK LNWAQLVRAD LSDADLRKAD LSWANLEFAT LIGANLRGAN
LSAADFSGAN LYGANLSLCN LSGADLRDTV MIGANLSEAQ LREAQLVNLS GANLSGAILL
RVSLNGANLN GANLAGANLM HANLREATLD EVNCIGANLS ETNLSEASLC NADFSDANLS
GIYLSGAHLR NAIFTRANLS RANLSGANLR GANLRGVNLR EASLADADLT DADLTDADLT
DCDLSGAKGL R