Gene Cagg_2330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2330 
Symbol 
ID7268680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2831797 
End bp2833878 
Gene Length2082 bp 
Protein Length693 aa 
Translation table11 
GC content58% 
IMG OID643567160 
Productprotein of unknown function DUF255 
Protein accessionYP_002463645 
Protein GI219849212 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1331] Highly conserved protein containing a thioredoxin domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00802642 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCACCG GTGCCCGCCC ACTCAACCGG CTCGCCAGCG AAGCCAGCCC ATATTTACAA 
CAGCACGCCG ATAATCCGGT CGATTGGTAT CCGTGGGGGG AAGAAGCACT CGAACGTGCG
CGACGTGAAG ATAAGCCACT GTTGGTGAGT ATTGGCTACG CAGCCTGCCA TTGGTGCCAC
GTGATGGCTC ACGAGAGTTT TGCCGATCCT GAGATTGCAG CTATCCAAAA CGAATATTTC
ATCAATATCA AAGTTGACCG CGAAGAGCGG CCCGACCTCG ACAGCATCTA CATGGCAGCG
GCCCAGGCGC TCACCGGGCG GGGCGGGTGG CCGCTCAACG TCTTTTGTCT TCCCGACGGG
ACACCATTCT TCGCCGGTAC TTATTTTCCA CCTGATGCGA AGGCGAACCG GTATCGGATG
CCGAGTTGGC GCCAGGTGTT ACTCTCGATC GCCGAAGCCT ATCGTACTCG ACGCGACGAT
CTGACCGCTT CAGCCCAAGA GTTACTCAAT CATATCAAAC TGTTGGCTCA GCCACTGCCC
GAAACGGCAA CCGTTGACGA GGCACTGCTG CTGGAGGCTG CGGCCAAGCT TGAGCGTGAA
TTTGACCCTC AGTACGGCGG GTTTGGTGAT GCGCCGAAGT TTCCGCAGCC GCTCGTGCTT
GAATTTCTCT TACGAACCCA CCTGCGAGGT CACGTGCAGG CTTTGCCGAT GCTCCACCAA
ACACTCGAAC AGATGGCTCA CGGTGGGATG TACGATCAGG TTGGGGGCGG CTTCCACCGC
TATAGTGTTG ATACGCGCTG GTTAGTACCC CACTTCGAGA AGATGCTCTA CGATAACGCG
CTGTTGGCCG AAGTGTATCA TCTGGCCGCC CTCGTCACCG GTGATCCGTT CCTTGCCCAG
ATCGCCGACG AGACGTTTGC CTATCTGCTG CGCGATCTAC GCCATCCCGA AGGTGCTTTT
TTTAGCAGCG AAGATGCCGA TAGCTTACCG GTACCCGGCG CCGCCCACGC CGAAGAGGGT
GCGTTTTATG TCTGGACACC GGACGAATTG CGGTTGGCGC TAGGCGACGA TGCAACAATC
GTCGGTGCGT ACTATGGGGT AACGCGGCAG GGCAACTTTG AGGGTAAGTC GATTTTGTAT
GTGCCACGTT CGGCGTCGGC AGTCGCGGCA AGGCTCGGAG TGCCGGTTGA GCGCGTTACC
GAGACAGTTG AACGTGCGCG ACCGATCCTG CGTACATTCC GTGAGCAGCG TCCACGCCCC
TTCCGTGATG AAAAGATTAT TACCGCATGG AATGCATTGG CGATCAGGGC ATTGGCGACG
GCGAGCGCGC GGGTGCCAGA ATATTTGTCC GCTGCCCGCC AGTGCGCCGA TTTTCTGCTG
GCAAACCTGC GTCGCGCCGA TGGTCGGTTG TTGCGCAGTT GGAAGGATGG TCGGCCCGGC
CCGGCCGGTT TTCTCGATGA TTATGCGCTA CTCTGCGATG CACTGCTCGA ATTGCACGCT
GCTGGTGGTG AGACGTACTA TTTGGCAACA GCCATCGAGT TGGCCGAGGC GATGCTTGAT
CTATTCTGGG ATGCACAGTC GTGGATGTTT TTTGATACCG GGCGCGATCA GCCGGCATTG
GTGACTCGTC CGCGCGATCT CAGCGATAAT GCCACACCGT CGGGTACGTC GGCAGCAACG
ATGGCATTGT TGCGATTGTA TGCACTGACC GGCAATGATC TGTTCGCTAC GCGGGCCGAG
CAGGTGTTGC AACAAGTAGC ACCGATGTTG ATCCGTTTTC CGCTTGGCTT CGGTCGCATG
TTGTGCGCGG CCGATCTGAT GATCGGGCCG ATTCGCGAAT TGGCCATTAT CGGCCCCTCC
GGCCATCCGG CGACTCAAGC CCTATTGGCG GTGGCCCGCT CTGCCTATCG GCCCCGACTG
GTGATCGCCC ACGCCGAACC CGGCGATCCG ATCGCTGAAC AGGTGGCATT ACTCGCCGGA
CGCACGTTGA TCGATGGTCA ACCAACAGCC TATCTCTGTG AACGGTTTGC TTGCCGGTTG
CCGGTCACGA CACCCGAAGC GTTGCTGGAA CAGTTAGGGT GA
 
Protein sequence
MSTGARPLNR LASEASPYLQ QHADNPVDWY PWGEEALERA RREDKPLLVS IGYAACHWCH 
VMAHESFADP EIAAIQNEYF INIKVDREER PDLDSIYMAA AQALTGRGGW PLNVFCLPDG
TPFFAGTYFP PDAKANRYRM PSWRQVLLSI AEAYRTRRDD LTASAQELLN HIKLLAQPLP
ETATVDEALL LEAAAKLERE FDPQYGGFGD APKFPQPLVL EFLLRTHLRG HVQALPMLHQ
TLEQMAHGGM YDQVGGGFHR YSVDTRWLVP HFEKMLYDNA LLAEVYHLAA LVTGDPFLAQ
IADETFAYLL RDLRHPEGAF FSSEDADSLP VPGAAHAEEG AFYVWTPDEL RLALGDDATI
VGAYYGVTRQ GNFEGKSILY VPRSASAVAA RLGVPVERVT ETVERARPIL RTFREQRPRP
FRDEKIITAW NALAIRALAT ASARVPEYLS AARQCADFLL ANLRRADGRL LRSWKDGRPG
PAGFLDDYAL LCDALLELHA AGGETYYLAT AIELAEAMLD LFWDAQSWMF FDTGRDQPAL
VTRPRDLSDN ATPSGTSAAT MALLRLYALT GNDLFATRAE QVLQQVAPML IRFPLGFGRM
LCAADLMIGP IRELAIIGPS GHPATQALLA VARSAYRPRL VIAHAEPGDP IAEQVALLAG
RTLIDGQPTA YLCERFACRL PVTTPEALLE QLG