Gene Cagg_2287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2287 
Symbol 
ID7266700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2790911 
End bp2791417 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content52% 
IMG OID643567117 
Productlipoprotein signal peptidase 
Protein accessionYP_002463602 
Protein GI219849169 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0597] Lipoprotein signal peptidase 
TIGRFAM ID[TIGR00077] lipoprotein signal peptidase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.647846 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGCTCT TACAGGCACG CTGGATCACA CCGTTGCTCG TGGCGGCGTT GGTAATTGGG 
CTGGATCAGG CTTCCAAGCG CTGGATTATC GACACGCTTG GTCCAACGCC GATGACGCGC
TTTATTCCGC TGATCGGTGA GGATATCCGG CTGGCGTATT CGCATAATAC CGGTATCGCG
TTTAGCCTAT TCCAAGGCAA ATCGGATATC CTGACGGTTG TTGCGTTTGT GATTATGAGC
GGCGCGATTT ATCTCTACGT AACCCAACTC CCGAACCGAC GTAAACTGGT GCAAGTCGCG
ATGGGGCTGA TTCTCGGTGG AGCACTTGGT AATGTGATCG ATCGCATTCG TTTGGGATAC
GTCGTCGATT TTATCCAGGT AGGCTGGTTC CCGATCTTTA ATCTAGCCGA TAGTGCGATT
ACCGTCGGCG CGGCCCTATT GATGTTGCAA TATGCACTTG ATGAAATCGC GTTGCGTCGG
TTACGCCAGG CGATGATGTC ACAATAA
 
Protein sequence
MKLLQARWIT PLLVAALVIG LDQASKRWII DTLGPTPMTR FIPLIGEDIR LAYSHNTGIA 
FSLFQGKSDI LTVVAFVIMS GAIYLYVTQL PNRRKLVQVA MGLILGGALG NVIDRIRLGY
VVDFIQVGWF PIFNLADSAI TVGAALLMLQ YALDEIALRR LRQAMMSQ