Gene Cagg_2223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2223 
Symbol 
ID7266796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2720713 
End bp2721645 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content58% 
IMG OID643567054 
Productbeta-lactamase domain protein 
Protein accessionYP_002463542 
Protein GI219849109 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0323902 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGTCT ATCCTACCCC GTCCGATATT GCCCTGATCG ATGTCTACCA TCTTGGGCGT 
GCCCACGTGA TCGGTACGTT TCTGCTCCTT GGTGATGCGC CGGCACTGAT CGATCCGGGG
CCGGCCAGTA CTTTACCCGC CCTGAAGGCC GGTCTCGATG CCCACGGTCT GTCGGTGGCC
GATCTACGTG CAGTAGTACT CACCCATATT CACCTCGACC ATGCCGGAGC AACCGGATTG
TTGGCGGTGG AAAATTCGCA TTTGGTAGTA CACGTGCATG AGCGTGGGGC ACCGCACCTG
ATCGATCCGT CTCGCTTGCT GAACAGCGCT AGCCTATTGT ACGGTGATCG GATGGAACAG
CTCTGGGGTA ATGTGCGCCC GGTCGCGCCG GAACGCATCC GTGTGTATAC CGGTGGTGAA
ACATTACGGC TCAATGGTCA TACTTTGCGC GCATTTGATG CTCCCGGTCA CGCTAAGCAT
CATCTGGTAT GGTTTGATGA GGCAAATGGG GCTGCCTTTG TGGGTGACAA TACCGGCGTT
CGTTTGCCCG GTGTGCGGAT GACCCGCCCG GCTACCCCAC CGCCCGATGT CGACCTCGAA
GCTTGGGGGC GCACACACGA TCTGATCGAG CAACTGCATC CGCAATGGCT ATGTCTCACC
CATTTCGGCG CGTATGATGA TGTAGCCTTC CACTTAGCCG ATGCACGGCT ACGCTTACGC
CAGTGGGCCG AGATTGTACG GCAGAGTCTA CTTGCCGGCC ATGATGAAGC AACCGGCGTT
GCCACCCTCG AAGCAGCACT GGCAAGTGAA GCCGCCACCC TTTCGCCGGT CGAACAAGCA
GCGATCATCC AGCAGACCGG TCCACTTACG CTCAGTTGGC GCGGCTTAGC ACGCTATTGG
CAAAAACTAG GGGTATCAGG AGTACGTTCA TAA
 
Protein sequence
MEVYPTPSDI ALIDVYHLGR AHVIGTFLLL GDAPALIDPG PASTLPALKA GLDAHGLSVA 
DLRAVVLTHI HLDHAGATGL LAVENSHLVV HVHERGAPHL IDPSRLLNSA SLLYGDRMEQ
LWGNVRPVAP ERIRVYTGGE TLRLNGHTLR AFDAPGHAKH HLVWFDEANG AAFVGDNTGV
RLPGVRMTRP ATPPPDVDLE AWGRTHDLIE QLHPQWLCLT HFGAYDDVAF HLADARLRLR
QWAEIVRQSL LAGHDEATGV ATLEAALASE AATLSPVEQA AIIQQTGPLT LSWRGLARYW
QKLGVSGVRS