Gene Cagg_2206 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2206 
Symbol 
ID7266779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2701378 
End bp2703048 
Gene Length1671 bp 
Protein Length556 aa 
Translation table11 
GC content53% 
IMG OID643567037 
Producthistidine kinase 
Protein accessionYP_002463525 
Protein GI219849092 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTACGAT CGTTGTTTTA TCTCCGTGGT TATCAGGGGT ATGATAGACC TATGGCCTTA 
ACGGTTGAAC AACGGGTGTT AATGGAAACC GGTAGTGCGT ATCTGATAGT TGATCGTGAT
CTACGGATAC ACGGTGTCGG TGGCTTGGTG AGTCTGATCG GTGATGATTC ACCGATCGGT
TTACCCTTGA CTGAAGTGAT TCCAGAGTTG TTCGGTAATG AATCGGCGTT GGCTGACATC
CTCAACGGTC AGCTCGACCG GTTAAGCCTC CCGTTGATCA ACCGTTCGCT GCCTGATGGC
TCGGTACGTT ATCTCGATTT GCTGACGGTA CCGCATACCG ATGACGATGG TACTATTGTT
GGGCTACTCC AAATCGTTGT CGATACGACG AACCGTAGCA TGACGGAACA GTTGCTCACG
CAGCGCCGCA ATGAGTTGCA TTTGTTGAAA GATCGTATTC AGCGCCAGAA TGTGGAACTT
GCGCGTATTA ATGCCGGTTT GCTGCGTGTT ACCAAGTTGA AAGATGAGTT TCTCGCCAGT
ATGAGCCACG AAGTGCGCAC ACCACTGACC GCGATTCTGG GCTTGGTCGA TGTGCTGCGC
GCACAATTGG TTGGTCCGCT GAGTGAGGAA CAAATGGGTG CGATCAATGG GATTAAACAG
GGTGGTCAAC ATTTACTGGC ACTGATTAAC GATTATCTCG ACATTGCCAA GATTGAAGCC
GGGCGCTTAG AACTCGATCT GACACCGGTG TCGGTGCATG ATATTTGCCA GTCGCTGCGC
CCCATGATTG CCGATATGGC AAAACGCGCC GGTCTCCAGT TGGTCTACGA TCTCGATCCC
ACGGTACAGG TTATGTTGGC CGACGCGCGC CGGTTGCGTC AAATTTTGAT CAACCTCCTC
TCAAATGCCA TCAAGTTTAC GCCGGCTGGG GGGAAGGTCG GGTTAGAAGT ACGCGGTGAT
GCCGAACGCG GGGCCGTCCG CTTTACCGTA TGGGATACCG GGATAGGAAT ATCGGCTGAA
GACGCAGCTC GTCTGTTTGA ACCGTTTCAA CAGATTGAGA GTGAACGCCA AAAAGAAGTA
ACCGGGAGTG GGCTTGGTCT GGCGTTGGTA GCGAAATTGG CCCGCTTACA CGGTGGGAGT
GTGAGTTTGG AGAGTGAGGT TGGGGTCGGG AGCCGCTTCC ACGTGACGTT GCCGTGGGAA
CTCGAAGAGC AACAACGGTT GTTAGCTTGG TTTTCGGAGG AACGACAGAA AGAGGCAGAG
CTGCCTTTCG ATGTGCCTCC TGCATCACCG CTCGCTGGTG ATCGTCCCTT GCTGATGGTT
GAGGACGATC TGTCCACCGC CGCTCTCTTT TCCCAATACC TGACACACTG TGGCTACCGC
GTGGTCCATG TCGAGTCGGG CGAAGAGGCG TTGGCGTATG TCCAAGGTGA TATGCCTTGC
CTTGTGCTGC TCGATGTGCG CTTGCGGACA ATGGACGGGA TAGAGGTTAT GCGCCATTTG
CGCAACGATC CGATGACACG CAACCTACCG ATTCTGGTAT TGACGGCGTT GGCAATGCCG
GGTGATCGTG AGCGTTGTCT GGACGCCGGG GCTGATGATT ATCTGGCCAA GCCGGTGCGG
TTAAACCAAT TGGCCAAGCA AATTGCTCTG TTACTCGAAC GTAAGCAGTG A
 
Protein sequence
MVRSLFYLRG YQGYDRPMAL TVEQRVLMET GSAYLIVDRD LRIHGVGGLV SLIGDDSPIG 
LPLTEVIPEL FGNESALADI LNGQLDRLSL PLINRSLPDG SVRYLDLLTV PHTDDDGTIV
GLLQIVVDTT NRSMTEQLLT QRRNELHLLK DRIQRQNVEL ARINAGLLRV TKLKDEFLAS
MSHEVRTPLT AILGLVDVLR AQLVGPLSEE QMGAINGIKQ GGQHLLALIN DYLDIAKIEA
GRLELDLTPV SVHDICQSLR PMIADMAKRA GLQLVYDLDP TVQVMLADAR RLRQILINLL
SNAIKFTPAG GKVGLEVRGD AERGAVRFTV WDTGIGISAE DAARLFEPFQ QIESERQKEV
TGSGLGLALV AKLARLHGGS VSLESEVGVG SRFHVTLPWE LEEQQRLLAW FSEERQKEAE
LPFDVPPASP LAGDRPLLMV EDDLSTAALF SQYLTHCGYR VVHVESGEEA LAYVQGDMPC
LVLLDVRLRT MDGIEVMRHL RNDPMTRNLP ILVLTALAMP GDRERCLDAG ADDYLAKPVR
LNQLAKQIAL LLERKQ