Gene Cagg_2193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2193 
Symbol 
ID7266766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2688059 
End bp2688979 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content53% 
IMG OID643567024 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002463512 
Protein GI219849079 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.692762 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATGC AGAAGTCCCG TCAAGAGCGC CATCCGAACA CATTACGGCG TGAACATCGC 
GAGTGGTTGC TCTTTGCACT CTTTATCGGC CCGAATCTCC TACTTTTTGC TGTCTTTACG
TATTGGCCGC TGATATACAA CGTCTACCTT AGTCTGGTGC GCTGGGATTT TTTGCGCCCG
ACGATGACGT TCGTAGGTCT ACAAAACTAC ATCACGGCAT TTGGTGATCC TCGCTTTTGG
AACATTATCT GGCAAACGGC CACGTTTACC GTGTGGTCGG TCGGTTTAAC GTTGATCTTG
GGGTTGTTGT TGGCCTTGTT GCTCAACCAA CCGCTCCGTT TCCGCAACAC CGCCCGGGCG
ATTGTTTTCT CGCCGGTAGT GATTTCAGGG GCGGTGGTGG CGGTTGTGTG GAGCTATATC
TTCGATCCGC GCTACGGCCT CATCGACCAG TTGTTGGCTT TGATCGGTCT TGATTCACCC
AATTGGTTGG CCGATCCGTT TTGGGCTATG CCGGCGGTAA TTATCGTGTA TGTGTGGAAG
AATATCGGTT ATGCAGTGGT GATTTATCTC GCCGGCCTGC AAAATATTCC CCGCGAGTTG
TACGATGCCG CTCGCGTTGA TGGCGCCGGT GCGTGGGAAC GGTTTTGGCA TGTGACGCTC
CCCGGCCTTT CGCCGGTGGC CTTCTTCCTT TCGGTCACGA GTATTCTCGC CTGCTTTCAA
TCCTTCGACA TTATTCGCGT GCTGACCAAC GGTGGTCCCG CCGATGCGAC CACGACCCTG
ATTTTTCACC TCTACGAGTT GGGTTTTGTC TCGTATGACG CCGGTAAAGC AGGTGTGGTG
GCTGTGGTGT TGTTCTTAAT CATGCTCGCG CTGACGATCG TGCAAATCCG GTATATCGAG
CGGCAAGTGA CGTATGGATG A
 
Protein sequence
MTMQKSRQER HPNTLRREHR EWLLFALFIG PNLLLFAVFT YWPLIYNVYL SLVRWDFLRP 
TMTFVGLQNY ITAFGDPRFW NIIWQTATFT VWSVGLTLIL GLLLALLLNQ PLRFRNTARA
IVFSPVVISG AVVAVVWSYI FDPRYGLIDQ LLALIGLDSP NWLADPFWAM PAVIIVYVWK
NIGYAVVIYL AGLQNIPREL YDAARVDGAG AWERFWHVTL PGLSPVAFFL SVTSILACFQ
SFDIIRVLTN GGPADATTTL IFHLYELGFV SYDAGKAGVV AVVLFLIMLA LTIVQIRYIE
RQVTYG