Gene Cagg_2181 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2181 
Symbol 
ID7266754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2675060 
End bp2676202 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content61% 
IMG OID643567012 
Producttransposase, IS605 OrfB family 
Protein accessionYP_002463500 
Protein GI219849067 
COG category[L] Replication, recombination and repair 
COG ID[COG0675] Transposase and inactivated derivatives 
TIGRFAM ID[TIGR01766] transposase, IS605 OrfB family, central region 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.538688 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACGT TTGTCTCCAC GTTACGTCCG ACACCTGCTC AAGGAGCGTG TCTTTCTGAG 
ACGGTGGAAA CTTGCCGCCA ACGCTATAAC CACGCTTTGA GCGAGCGCAA GACCGCCTAT
CGGGAACGTG GCGAGTCCAT CGGCTTTGCG CGCCAATGCG CCAGCCTGCC TATGCTGAAA
CGGGAGGTGC CATATTTGCA GCGTGTCCAC TCTCAAGTGG TGCAGGATGT CGTGCGTCGA
GGAGACCGCG CGTTTCAAGC GTTCGTTCGG CGGGTGAACG CCGGCGAAAA GGCGGGGTAT
CCGCGCTGCA AAGGGCGGGG CCGGTACGAT AGTTTCACCT ATCCCCGGTG GGGCAACGGC
GTCAAGCGGG AGCAGGGACG GCTCGTCCTC TCCAAAATCG GCGCTATTCG GCTGTACAAC
GATCGCCCGG TTGAGGGCAC GCCAAACATC TGTATCATCG TTCGCAACGC GGATGGATGG
TACGCACACA TCGTGTGTGA CGTTGCACCG TCGCCACTCC CGCCAACCGG CAGGTCGGTA
GGGATTGATG TTGGACGTGA GTCGTTTGCG ACGCTGTCGA ACGGCGTACA GATTGCCAAC
CCGCGCTCCT ATCGCGCCGC CGAACGCACG CTGAAACAGG CGCAACGACG GCTCGCTCGT
CGCGTGAAGG GCAGCAATCG CTCCCGTCAG GCACGCACAT TGCTTGTGAA CGCTCACCTG
AAGGTCAAGC GGGCGCGACG GGACTTCGCC CACACAATCG CCCGCGCACC GGTCAATGAG
GATGACCATA TTGCGGTTGA AAAACTGAAC ATTCGGGGGA TGGTACGGAA CCATCCCCTT
GCCAAATCGA TCTCCGACGC CGGATGGGGT TTCGTTCTGA ATATCCTGCT CGCCAAGGCT
GCACGTGCTG GGCGAGTCGT GGTGGCAGTC AACCCTGCCG GAACGTCGCA CGTATGCGCG
CACTGTGGCG AGTTCGTCCC CAAACGGCTT GCCGTTCGCT GGCACTCCTG CCCGTATTGT
GGTTGTGCGT TGCACCGCGA TCATAATGCT GCGCTTACTA TCCTAAAGAA GGGCGGGGGC
ACCGCCTTCG GGGAGGCTCA GCCGTTGGGC GAGCCGCAGA ACCGAGAACC CCACAGGCTT
TAG
 
Protein sequence
MKTFVSTLRP TPAQGACLSE TVETCRQRYN HALSERKTAY RERGESIGFA RQCASLPMLK 
REVPYLQRVH SQVVQDVVRR GDRAFQAFVR RVNAGEKAGY PRCKGRGRYD SFTYPRWGNG
VKREQGRLVL SKIGAIRLYN DRPVEGTPNI CIIVRNADGW YAHIVCDVAP SPLPPTGRSV
GIDVGRESFA TLSNGVQIAN PRSYRAAERT LKQAQRRLAR RVKGSNRSRQ ARTLLVNAHL
KVKRARRDFA HTIARAPVNE DDHIAVEKLN IRGMVRNHPL AKSISDAGWG FVLNILLAKA
ARAGRVVVAV NPAGTSHVCA HCGEFVPKRL AVRWHSCPYC GCALHRDHNA ALTILKKGGG
TAFGEAQPLG EPQNREPHRL