| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_2154 |
|---|
| Symbol | |
|---|
| ID | 7267662 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | + |
|---|
| Start bp | 2644027 |
|---|
| End bp | 2644800 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 643566986 |
|---|
| Product | alpha/beta hydrolase fold protein |
|---|
| Protein accession | YP_002463474 |
|---|
| Protein GI | 219849041 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0016859 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCATC GCGTTACGCT TCATGACGGC GCAGAAATCG CGTATCACGA TCTTGGGAGT
GGGCCGCCGG TGTTACTCAT ACATGGCTTT GTCGGTACTG CTCGTACCCA TATGGGATTA
CTGATCGATG ATCTGAGCCG CGATCATCGT ATCATTGCCC CCGATCTGCG CGGTTACGGC
GCGAGCCGGC CACCCAACCG TACCTTCCCG CCTGATTTTT ACCAGCGTGA TGCTACCGAT
ATGGCTGAAC TGCTCGATCT CATTCAGCCA GGACCGGCAG TTGTAATGGG CTTTAGTGAT
GGTGGAGAGA GTGCTCTGAT CTTGGCGGCG AGCCGGCCTG ATGTGCTTCG CGGCGTGGTT
GCGTGGGGCG TGTCTGGTGT GATGAGTCAA GCGATGGTCA ATGCCGTGCA AGATTGGCTA
CCGGCAACGG CGTGGGTCGA ACGGCGCCCA AGTTGGCGAC AAGAGATTAT AGAACTGCAC
GGCTCCGAAC AGTTTGAAGC GATTATCGAG GGCTGGGTCC ATGCTGCACA GGCAATTGCC
GCATCCGGCG GTGATATTTG CTTCCAGACA GCGTCCCGTA TTCGTTGTCC GGCACTGCTG
ATCAACGGTG ATGGTGAACG GAACAATCTA CCCTCTGATG TGCAACGATT GGCCGCAACT
ATCCCCAATT GCCGGCTTGA GTTTGTAACT AATAGCGGCC ATGCGATCCA AGAGGATCAA
CCGGAAGAAC TGATCCGGCT GATCCGACAG TTTCTCGCCC AGCTAGCACT GTAG
|
|---|
| Protein sequence | MQHRVTLHDG AEIAYHDLGS GPPVLLIHGF VGTARTHMGL LIDDLSRDHR IIAPDLRGYG
ASRPPNRTFP PDFYQRDATD MAELLDLIQP GPAVVMGFSD GGESALILAA SRPDVLRGVV
AWGVSGVMSQ AMVNAVQDWL PATAWVERRP SWRQEIIELH GSEQFEAIIE GWVHAAQAIA
ASGGDICFQT ASRIRCPALL INGDGERNNL PSDVQRLAAT IPNCRLEFVT NSGHAIQEDQ
PEELIRLIRQ FLAQLAL
|
|---|
| |