Gene Cagg_2137 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2137 
Symbol 
ID7267645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2628503 
End bp2629903 
Gene Length1401 bp 
Protein Length466 aa 
Translation table11 
GC content58% 
IMG OID643566969 
ProductPeptidase M23 
Protein accessionYP_002463457 
Protein GI219849024 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000635965 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAGGTTA TTTTTAATCA TCCTCCATGG TTTGAGCGAT GGATGCGCAG TCGGCGACGG 
CTTGCTACGG CGCGTTATAC CGTGCGTCGG TTGCGTAATC GGACGATTGT CTCGGTACTA
CGACCACCTG ACGTTGCTCC CCTTCCGGTG GTGCAATGGC GCTTCCGCCT GTCACGTCAG
GTTGGTCATG GATTTCTCCT CCTCGCCGTT ATCGTCATGC TCGCAGTTGA TTATAGTTTC
CCTTGGCAGC AACTGATTAC GGGTCGGCAT CAGGTGCATA CACCGAGTGT GGCGACAGTG
GTGGCAACGT CGGCCGAGCA AGCGGTAGGC GTGGCGAGGG CAGTACGGGT GACCGCATCG
GTAGCTCGTG AACCTGAGCC GATTGCACCG GCGTTACGTG CGCCGGTGCC GGTAGTGACG
GCATATCGAA CAACCCACCT GCTCGCGGAG GGGGAGACCC TGGCTGAGGT GGCGGCTCGC
TATCAGATTC CGCTAAGCAC ATTAGTATGG ACAAACGGCC TTGATCGTGG CGATGCCTTG
CGGGTGGGGC AACCGTTGCG GATTGCCCGT TTGGCCGGTG TGACCCACAC CGTAGAGGCT
GGAGAGACGT TAGCCGCTTT GGCCGAGCGG TACGGGGTGG CACCGGAAGC GATTGCAACC
TTTGCACCGA ATCGGTTGCG CAACGGACAG TTAATCGTTG GCCAAGAGAT TTTTATTCCC
GGCGGGCGCC TGGCATGGTC ACCCGAACAA GAAGCGGCAT TTGCCCAGCG TAAGGCCGAG
CCGGTTGGGA TCGTCCTCGC TAATGAAACA AATGTTCGTT CTGGTCCAAG CACCGATCAC
CAACGTCTTG CCCAATTAAC CGCTGGGCGG CAAGTTGCGT TGCGTGGGCG GTATGGCGAT
TGGGTATTGG TTGCTCTTGG GGAAACGATC GGTTGGATTC GCAGCGATCT GCTCGAGTTG
GATCCGGAAC AGGTTGCCGC ACTGCCGGAA GTGCGCGACT TCCCTCCCCC ACCGCCTCGT
TGGGTTTGGC CGGCGCAGGG GGTGTTAACT TCAGGGTTTG GCCCACGTTG GGGCGGCTTT
CATAATGGTA TCGACATTGC GAATGTGGCT TGGACTCCAA TTGTGGCTGC GAGTCGTGGT
TGGGTGTACG AAGCCGGCCG GTGTAGCGGT TACGGCTACT GTGTGAAGAT TCGCCATCCC
GGCGGGATTG AGACGATTTA CGGTCATTTA GTTACCCGCC CGGTTGTGCA GGTTGGTCAG
GAAGTCAGTA CCGGCCAATT AATCGGTTAT ATGGGAAGCA CTTACGATCG TGCCGGTGGT
GGATACTCGA CCGGCGTGCA TCTCCACTTT ACGATCCTCG TCAACGGACG TGCAGTGAAT
CCACTCCGTT ACCTACCGTG A
 
Protein sequence
MQVIFNHPPW FERWMRSRRR LATARYTVRR LRNRTIVSVL RPPDVAPLPV VQWRFRLSRQ 
VGHGFLLLAV IVMLAVDYSF PWQQLITGRH QVHTPSVATV VATSAEQAVG VARAVRVTAS
VAREPEPIAP ALRAPVPVVT AYRTTHLLAE GETLAEVAAR YQIPLSTLVW TNGLDRGDAL
RVGQPLRIAR LAGVTHTVEA GETLAALAER YGVAPEAIAT FAPNRLRNGQ LIVGQEIFIP
GGRLAWSPEQ EAAFAQRKAE PVGIVLANET NVRSGPSTDH QRLAQLTAGR QVALRGRYGD
WVLVALGETI GWIRSDLLEL DPEQVAALPE VRDFPPPPPR WVWPAQGVLT SGFGPRWGGF
HNGIDIANVA WTPIVAASRG WVYEAGRCSG YGYCVKIRHP GGIETIYGHL VTRPVVQVGQ
EVSTGQLIGY MGSTYDRAGG GYSTGVHLHF TILVNGRAVN PLRYLP