Gene Cagg_2134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2134 
SymbolruvA 
ID7267642 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2626171 
End bp2626758 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content56% 
IMG OID643566966 
ProductHolliday junction DNA helicase RuvA 
Protein accessionYP_002463454 
Protein GI219849021 
COG category[L] Replication, recombination and repair 
COG ID[COG0632] Holliday junction resolvasome, DNA-binding subunit 
TIGRFAM ID[TIGR00084] Holliday junction DNA helicase, RuvA subunit 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.856024 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000118824 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATTGCAT CAATTCGCGG CGTGATCCAG AGCATTGGTA ATGACTATCT GATAGTTGAA 
ACCGGCGGTA TTGGCTTTCT GATCTATGCA CCACGCTCAA CCCTCAGTGC CGCCGGTGCA
GTTGGTAGCG ACATCTTCCT TCACACCATC TTAATTGTGC GAGAAGATGC GCTCACCCTC
TACGGTTTCA GCGACAACGC TCAGCGTAGT CTCTTTGAAC AACTGATCGG AGTTAGTGGA
GTTGGGCCAA AATTGGCGCT GAGTTTGCTA TCGAGCGGGA CACCGGATGA AGTGCGGAGC
ATGATCGCCG GTGGAGACGT AGCCCGATTG GCGCGGGTAC CGGGGATCGG CAAGAAGACG
GCCGAGCGGA TTGTGCTTGA GTTGCGCGGC AAGATCGATT TCCGCCAGCT CGCGGCGAGC
GGCAGTACGA GTGTCAGCGC TCTTGATCGC GAACTCAGCG AGATTTTAGT CAGTTTGGGC
TACAGCGCCG CCGAGGCAGC CGCAGCGATC GCATCGTTAC CCAGTGACGC ACCACCGACG
TTAGAGGAAC GATTACGGTT GGCGTTACGC TATTTCGGCA GCGCATAA
 
Protein sequence
MIASIRGVIQ SIGNDYLIVE TGGIGFLIYA PRSTLSAAGA VGSDIFLHTI LIVREDALTL 
YGFSDNAQRS LFEQLIGVSG VGPKLALSLL SSGTPDEVRS MIAGGDVARL ARVPGIGKKT
AERIVLELRG KIDFRQLAAS GSTSVSALDR ELSEILVSLG YSAAEAAAAI ASLPSDAPPT
LEERLRLALR YFGSA