Gene Cagg_2132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2132 
Symbol 
ID7267640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2624398 
End bp2625669 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content56% 
IMG OID643566964 
Producthypothetical protein 
Protein accessionYP_002463452 
Protein GI219849019 
COG category[S] Function unknown 
COG ID[COG3174] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.524155 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000326066 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCTCGATA ACATCGCTAG CACTGAACTC TTTTACCAAT TCGGCCTTGC CCTACTCATC 
GGCGCGCTCA TTGGCCTACA ACGCGAGTAT GCTCACGGTG CTAGCAGTGA TCTTTTCGCC
GGTGTACGCA CATACGCAAT CATCGGTGTG ATCGGCTGTG CAGCCGGTTT GGCCGCGATC
ACGCTCCAAG CACCGGAAAT CTTTGCGGCG ATGGCCCTAG TAATAGGTGG ATTACTGATT
GCCGCATACG TTCTCAGTCA CGGACGCGAT GGCCCCGGTC TCACCAGCGA AATGGCTGTT
CTCATCACGT TCCTGTGTGG AGGAATGGTC GCGTGGGGCT ACGGAACGGT GGCAACGGCA
ATCGGGGTGG CAATTGCTAT TCTGCTAGCC CTGAAAGCCC GTCTACACGG CTTAGCGCGC
CAACTCAGCC CGCAAGATAT GCAAGCTTCG CTCACGCTGG CCGGTATCAG TCTCATTGTT
TTGCCGGTGT TACCGAATAC GCCGATTGGG CCAGCTCCAT TGGACGTGAT TAATCCGCAG
AAGATATGGC TACTCGTTGT GTTAATCTCG ACGCTGAGTT TCAGCGGCTA CATACTGCAT
AAAATTATCG GCACTACTCG CGGCATTGCG CTCACCGGTC TGATTGGTGG CATCGTTTCT
TCAACTGCGG TCACCCTCAG TAATACCCAA CGCAGCCGGA TCACGCCGGA ATTGAGTCAG
GCATACGCAC TGGCCATCTT GCTGTCGTGG GCGGTAATGT TTGTGCGTGT CGGGCTACTC
ACCGGCGCGA TTGCGCCGGA GGTCTTACAG CGATTATGGC CGGTGTTACT GGCAGGAGGC
AGCGGCTGCC TCATCTGGGG AGGATGGCTG GCGCGCCGGT CACGCCAGCA TGAGGGAACG
CCGTTGAATT TTGGCAACCC GCTTGAATTG CGTTCAGCAA TCGGATTCAG TCTCCTTTAC
ACTACTATCC TTGTCGGCGC CAATTTCGCC CGTACCCAGT TTGGTGAGAC CGGACTCTTC
ATTACCAGCA TCTTCGGCGG ACTTGTCGAT GTGGATGCAA TCACGTTATC GCTCAGCGAG
CTAGCAATCA CCTCTGGCGG GCTATCCAAT CGGTTAGCGG CCAGCGCTAT TGGAGTCGCC
GTTTTGACCA ACACATTGAT AAAAGGGGGA ATTGCGCTGG TCGGTGGGAG TAGCCGGTTG
CGCCGTTCAA TCACACCGGC GTTATTGCTG ATCACCGGAT CCATACTAGG CACACTCTTC
TGGCCGTGGT AA
 
Protein sequence
MLDNIASTEL FYQFGLALLI GALIGLQREY AHGASSDLFA GVRTYAIIGV IGCAAGLAAI 
TLQAPEIFAA MALVIGGLLI AAYVLSHGRD GPGLTSEMAV LITFLCGGMV AWGYGTVATA
IGVAIAILLA LKARLHGLAR QLSPQDMQAS LTLAGISLIV LPVLPNTPIG PAPLDVINPQ
KIWLLVVLIS TLSFSGYILH KIIGTTRGIA LTGLIGGIVS STAVTLSNTQ RSRITPELSQ
AYALAILLSW AVMFVRVGLL TGAIAPEVLQ RLWPVLLAGG SGCLIWGGWL ARRSRQHEGT
PLNFGNPLEL RSAIGFSLLY TTILVGANFA RTQFGETGLF ITSIFGGLVD VDAITLSLSE
LAITSGGLSN RLAASAIGVA VLTNTLIKGG IALVGGSSRL RRSITPALLL ITGSILGTLF
WPW