Gene Cagg_2129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2129 
Symbol 
ID7267637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2622094 
End bp2622540 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content53% 
IMG OID643566961 
ProductCheW protein 
Protein accessionYP_002463449 
Protein GI219849016 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000025846 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGATCAAAT CATCCCCCAC CACCATGGTT GTTGTCTGCC GGATTGGCAG TCGTTTTGTC 
GCACTACCTA TGCAGACGGT CGTGCATACC GCCCGCCTTA ACGAGATTGC CCCTCTCGGT
GATGCACCTG TGGTTGTGTG TGGTATGGTC TCGCTCTATG GGGCAACTGT ACCGGTGATC
GATGGCCGTT CGCTGCTTGG TGAACCACCC GGCTATGACT TCGATAGCCA TATTCTGCTT
GCAGCATCGG ATTTCGATCA ACCTCCTGAG ATCGGGTTAC TGGTTGATGA AGTGATGAGT
ATCCATCGCG TTGGCACCGA TGGTCTTGCT CCGCCCGATC ATATTGATGG TATTTCGTGT
GGTGTAATAC GCGATCTGCC CCATCCCGCA TTATTATTAG ATGTTGATGA ACTGTTTGCA
TTAGCCCACG GCAACGCCCG CGACTAG
 
Protein sequence
MIKSSPTTMV VVCRIGSRFV ALPMQTVVHT ARLNEIAPLG DAPVVVCGMV SLYGATVPVI 
DGRSLLGEPP GYDFDSHILL AASDFDQPPE IGLLVDEVMS IHRVGTDGLA PPDHIDGISC
GVIRDLPHPA LLLDVDELFA LAHGNARD