Gene Cagg_2121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2121 
Symbol 
ID7267629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2612109 
End bp2613119 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content55% 
IMG OID643566955 
Producttryptophanyl-tRNA synthetase 
Protein accessionYP_002463443 
Protein GI219849010 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0180] Tryptophanyl-tRNA synthetase 
TIGRFAM ID[TIGR00233] tryptophanyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0128322 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGCA AACCACGAGT CTTTTCTGGG ATTCAGCCAT CGGGCAACCT CCATATCGGT 
AACTATCTCG GTGCGATTCA GCAGTGGGTT GCCGGGCAAG GTCAGAAGAC CAACTTTATC
TGCATCGTTG ACTTGCACGC GATTACCGTG CCGCAGGAAC CGGCGGCATT GCACCGGCAA
ACCCGTGAAT TAGCTGCGCT GTTGCTGGCT TGCGGTATCG ATCCACAACA GACGACGCTC
TTTGTACAGA GTCATGTGCG CGCCCATGCT GAGTGTGCGT GGGTCTTTAG TTGCCTCACG
CCACTTGGCT GGCTCGAACG CATGACCCAA TACAAAACCA AAGCCCAAAA GCAAGAGAGT
GTGATGACCG GTCTGCTCAC CTATCCGGTG CTGATGGCCG CCGATATTTT GCTCTATGAC
GCCGATGAGG TGCCGGTCGG CGAAGATCAG AAGCAACATA TCGAGCTGAC CCGCGATCTG
GCACAGCGGT TCAACTACCT CTACGGCGAG ACCTTTGTCA TTCCTGAGCC GGTCATCCGT
GAGAGCGGAG CCCGCATTAT GGGCTTGAAC GATCCGACGT CCAAGATGAG CAAATCGGAT
ACCACTCGCG GTCATGCTAT TCGGATCGTC GATGAACCCG ACGAGATTCG CTGGGCGATC
AAGCGCGCCG TTACCGACTC GTACAACGAA ATCCGCTTCA GCGATGATCC AGATCGCGCC
GGTGTCAACA ATCTCTTGCA AATCTACGAG TTACTTACCG GAAAAAGTCG GCCTGAGATC
GAGGCACATT TTGCCGGCAA AGGGTATGGC GCACTAAAAA GTGAATTGGC CGAGGTTGTG
ATCGAGTCGC TTCGGCCCAT TCGTGAGCGG TACTATCAGT TGATGGACGA TCCGGCAGAG
CTAGATCGCA TTTTAGCGAT TGGCGCCGAA CAGGCGCGTG CCGTCGCCGA ACCCAAGATG
ACCCTGATCC TTGAACGGGT GGGTTTTGTG TTGCCGAATG ACCGGAAATA A
 
Protein sequence
MNRKPRVFSG IQPSGNLHIG NYLGAIQQWV AGQGQKTNFI CIVDLHAITV PQEPAALHRQ 
TRELAALLLA CGIDPQQTTL FVQSHVRAHA ECAWVFSCLT PLGWLERMTQ YKTKAQKQES
VMTGLLTYPV LMAADILLYD ADEVPVGEDQ KQHIELTRDL AQRFNYLYGE TFVIPEPVIR
ESGARIMGLN DPTSKMSKSD TTRGHAIRIV DEPDEIRWAI KRAVTDSYNE IRFSDDPDRA
GVNNLLQIYE LLTGKSRPEI EAHFAGKGYG ALKSELAEVV IESLRPIRER YYQLMDDPAE
LDRILAIGAE QARAVAEPKM TLILERVGFV LPNDRK