Gene Cagg_2060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2060 
Symbol 
ID7269219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2522778 
End bp2523872 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content56% 
IMG OID643566895 
Productpeptidase M50 
Protein accessionYP_002463384 
Protein GI219848951 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0750] Predicted membrane-associated Zn-dependent proteases 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGACG TTGACCCTAC CGTTGCCCTC CGCATGCTGG CTACTGAGGT GATGATGGTT 
ACGACCGGCG AAGAGCTGGT TCACGGCGAA CAACACGCTT TTCGTTACCG TGGTCAGTTG
TTACGTGAAG CGCAAGCTGC CCACGATGCG ATCGTGACCC GTGCTCAAGC GCTCGGTTAT
ACACCGCTGT TCCAAGCCGA TCCGGCCGGT GCCGCTATTC TGTTTATTCC CACGCCTCCC
AAAGCGCCAC CGTCGCGGCT CTGGTTAGCT GTGCTTCTGT TTGTCCTAAC CGTCGCCTCG
ACAATGTTCG TCGGCGGGCA AGAGTACATC GAGAGCACAG GGCAAGTCGT CTTTAACTGG
GGCTATGCAC TTAGCTTTAG CGGTTCGTTA TTAGCCATTC TGCTCGCGCA CGAGATGGGA
CACTTTATTG TTGCCCGCCG CGAGAAGGTA GCGGTGAGTT ATCCCTTCTT TATCCCGATG
CCGCTATTCC TTCTCGGTAC GATGGGGGCC TTTATCGCCA TCAAAGATCT CGTTCCCAAT
CGACGCTCCC TGTTGGCGAT CGGGATCGCC GGTCCATTAG CCGGCCTAGT CGTAGCCATT
CCTGTTCTTG CCATCGGTCT GAGCATCTCC GAAGTGAAGC AAGTTGTTCC GTTACCGGGC
AGCTTTACCG AAGGCAACTC ATTGCTTTAC GCAGCTATGA AAATTCTGAT CTTTGGCCGC
TTTTTGCCGA GCGGTGGTGA AGATGTCTAT CTGCATCCGG TGGCACTGGC CGGCTGGGCC
GGGTTATTGG TGACCGGTCT GAATCTGCTA CCGGCCGGTC AACTCGACGG TGGTCATATC
TTTTTTGCGC TGTTTGGCCC GCGTGCGGCC CGGATCATGA GTATGATCGT TGCCGTCGCC
TTGCTCGGCT TAGGCTTTTT GTGGTCGGGA TGGTTTATTT GGGCAGTGAT GATTGCCCTG
ATCGGGCAAC AACGCAGCCC GCTGCGCAAC GAGATTTCAC CGCTTGAGGG ACCATGGCGC
TGGTTGGCTT ATCTTGGCAT CTTGACGTTT CTTCTGGTCT TTACACCCAT TCCGATTACT
GTCACGGTGC CGTAA
 
Protein sequence
MFDVDPTVAL RMLATEVMMV TTGEELVHGE QHAFRYRGQL LREAQAAHDA IVTRAQALGY 
TPLFQADPAG AAILFIPTPP KAPPSRLWLA VLLFVLTVAS TMFVGGQEYI ESTGQVVFNW
GYALSFSGSL LAILLAHEMG HFIVARREKV AVSYPFFIPM PLFLLGTMGA FIAIKDLVPN
RRSLLAIGIA GPLAGLVVAI PVLAIGLSIS EVKQVVPLPG SFTEGNSLLY AAMKILIFGR
FLPSGGEDVY LHPVALAGWA GLLVTGLNLL PAGQLDGGHI FFALFGPRAA RIMSMIVAVA
LLGLGFLWSG WFIWAVMIAL IGQQRSPLRN EISPLEGPWR WLAYLGILTF LLVFTPIPIT
VTVP