Gene Cagg_2045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2045 
Symbol 
ID7269204 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2505143 
End bp2505979 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content57% 
IMG OID643566880 
ProductABC-3 protein 
Protein accessionYP_002463369 
Protein GI219848936 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00377513 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGATC TTCTGACAGC TCCGTTGGCG TATTCCTTCA TGCAGCGCGG ACTGATCGCA 
GCGCTGTTGG TCGGTATTGT CTGCTCCGTC GTCGGTGTGT ATGTCGTACT ACGCGGGATG
GCGTTTTTGG GCGATGCACT GGCCCACGCC ATCTTACCCG GCATTGCCGT CGGCTACCTC
GTTAACGGGG CCAACCGCGG GACGCTGTTT TGGTGGGCAT TGGGAACGGC GCTGGTCAGC
ACATTTTCGA TTGGCGCCAT CAGCCGGGCT ACTAAGATTC GTGAAGACAC CGCCATTGGG
ATCGTCTTTG CCGCGATGCT CGCGCTGGGT GTCGCCCTCA TTTCAACCGT GCGCAATTCG
GCGGTTGATC TGTCACACTT CCTGTTTGGC AATATTTTGG GGGTCAGCGA GAGCGATCTC
TGGCGGATCA CCCTCTTCGG CATAGTGGTC ATCACGGTGA TTATCCTCTT CTACAAGGAG
CTGATGGTGA TCACCTTTGA CCCGATTCTT GCCGCGACCT TGCGCTTACC GGTACGATTC
TTCGATGTGC TCTTGCTCAC GTTACTGGCT ATCGCGATTG TCGTTGCCAT TCAAACGGTC
GGCGTCGCGC TGACCATCGC CATTCTGGTG ACACCACCGG CAACCACAGC GTTCTTTACC
CATCGTATGC ACACCATGAT GATCGCGGCC ACCGGCCTGG CAATGATTGC CGGCGTGGTG
GGACTCTATG CCTCATACTA CTTTAGCATC GCTTCGGGGT CGGCGATTGT GCTGACCAGC
ACCCTCATCT TTGTGTTGGT ATGGATCGGT TCGCGTCTGC GTCGGCGTAA CGTCTGA
 
Protein sequence
MIDLLTAPLA YSFMQRGLIA ALLVGIVCSV VGVYVVLRGM AFLGDALAHA ILPGIAVGYL 
VNGANRGTLF WWALGTALVS TFSIGAISRA TKIREDTAIG IVFAAMLALG VALISTVRNS
AVDLSHFLFG NILGVSESDL WRITLFGIVV ITVIILFYKE LMVITFDPIL AATLRLPVRF
FDVLLLTLLA IAIVVAIQTV GVALTIAILV TPPATTAFFT HRMHTMMIAA TGLAMIAGVV
GLYASYYFSI ASGSAIVLTS TLIFVLVWIG SRLRRRNV