Gene Cagg_2020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2020 
Symbol 
ID7269178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2481213 
End bp2481593 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content55% 
IMG OID643566854 
Productsingle-strand binding protein 
Protein accessionYP_002463344 
Protein GI219848911 
COG category[L] Replication, recombination and repair 
COG ID[COG0629] Single-stranded DNA-binding protein 
TIGRFAM ID[TIGR00621] single stranded DNA-binding protein (ssb) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00175419 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAGCT TCAAAGGAAC GATGAATCGG GTCGAGTTGA TCGGGCGATT GGGGGCCGAT 
CCTGAACTCA AACAGGTAGG CAATGGTGTA ACGGTCTGTC GGTTTAATCT GGCGACCAAT
CGTCCGGGTG GCAACGATGA TCAGGGACAT CGGACCAGTG AAACTGAGTG GACGACGGTG
GAGGCATGGG AGCGTTTGGC AGAAGTGTGC GGTAATTATC TGCAAAAGGG GCGGCGGGTG
ATGGTGATGG GCAGCTTGCG CACCGACAAA TGGCAAGATA GTGAGAGTGG GCAAATGCGA
TGGCGGACGT ATGTACGTGC CGATGAGGTG ATTTTCCTTG ACGGTGGAGT TGGCCGGCAA
GAAGAGGGAG ATGAGGAGTA G
 
Protein sequence
MRSFKGTMNR VELIGRLGAD PELKQVGNGV TVCRFNLATN RPGGNDDQGH RTSETEWTTV 
EAWERLAEVC GNYLQKGRRV MVMGSLRTDK WQDSESGQMR WRTYVRADEV IFLDGGVGRQ
EEGDEE