Gene Cagg_2014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2014 
Symbol 
ID7269172 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2472324 
End bp2473298 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content57% 
IMG OID643566848 
ProductPfkB domain protein 
Protein accessionYP_002463338 
Protein GI219848905 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0524] Sugar kinases, ribokinase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGTGG ATACGCGGCG AGTGGTAACG ACCCTGGGCG ACATCAATGT CGATCTCGGT 
TTTATGTTGC CGCACTTTCC CCGCGAAGGT GATGACAACC CGGCCACGAC GGTACATTGG
GGTGGAGGTG GCTCTGGATT AAATATGGCC GTTGCCGTGG GCCGGTTAGG GGCGACCCCA
TATGTAATCG GTCGGGTTGG GAATGATCTC GCCGGATCAT TTGTGTTGCA AACTGCGCGT
GCACATGGAG TACAGGTGAG TGCGGTGCAG GTCGATCCGG TTGCAGCAAC CGGCCTGTGC
GGAATTGTTG TCACCCCGAA TGGTCAGCGA AGTTTTATGA GTTTTCGGGG GGCAAATGTC
TATTGTGATG CTTCGACGGT CACATCTTCC CTTATCCGGT CGAGTCGGAT CTTATTGGTA
GGGGCCCATG CACTACTTGA TGATCCGCAG CGATCGGCTG CATTGCAAGC GATGGAGCTA
GCGATTGAGC AGGGATGTGC GATTGCGCTT GATCTCTGCT TGCCGGCAGT GCGGATGGTA
CGACGCTTGA TCGTGCGACT TCTACCGCAG TTGTGGTTAC TCACGATGAA TGAAGATGAG
TTACGGGCAC TGTTGCCGGG GCAAAGCACA TCTCAGGCAC TCGATAGCCT GATCGGATCA
GGTGTGCGCC ATGTGGCGAT CAAGCGAGGC GCACAGGGGT GTAGTGTTGC CAGTGCTGAT
GGTGGGCGGC TCGATGTGTT ACCGCCGGCG GTTAGCGTAG TGGATACAAC AGCCTGCGGT
GATGCGTTCA GCGCCGCCTA CGCTTGGGCA TTGGCGCACG GGCTTGATCT CTCGGAGAGT
GCTACCATTG CCAATCTGAT GGGGGCATTA ACGGCAACAC GCCACGGGGC GGTTGAAGCC
ATTCCTAAAA GTGACGACAT TCGGAGTCGG CTAAGTACGG CGATCTGCGA ACGACTTTGG
CCGGTTAATG GATGA
 
Protein sequence
MDVDTRRVVT TLGDINVDLG FMLPHFPREG DDNPATTVHW GGGGSGLNMA VAVGRLGATP 
YVIGRVGNDL AGSFVLQTAR AHGVQVSAVQ VDPVAATGLC GIVVTPNGQR SFMSFRGANV
YCDASTVTSS LIRSSRILLV GAHALLDDPQ RSAALQAMEL AIEQGCAIAL DLCLPAVRMV
RRLIVRLLPQ LWLLTMNEDE LRALLPGQST SQALDSLIGS GVRHVAIKRG AQGCSVASAD
GGRLDVLPPA VSVVDTTACG DAFSAAYAWA LAHGLDLSES ATIANLMGAL TATRHGAVEA
IPKSDDIRSR LSTAICERLW PVNG