Gene Cagg_2002 details

Gene Information

• Locus tag: Cagg_2002
• Symbol: rplI
• ID: 7269157
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chloroflexus aggregans DSM 9485
• Kingdom: Bacteria
• Replicon accession: NC_011831
• Strand: +
• Start bp: 2449123
• End bp: 2449584
• Gene Length: 462 bp
• Protein Length: 153 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 643566833
• Product: 50S ribosomal protein L9
• Protein accession: YP_002463326
• Protein GI: 219848893
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0359] Ribosomal protein L9
• TIGRFAM ID: [TIGR00158] ribosomal protein L9

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0148705
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 21
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGAGCGCAA AGAAAATGAA AGTGTTGCTC CTGCAAGATG TTGAACATCT TGGCAAAGCG 
GGCGAAATCA AAGATGTAAG CGGCGGTTAT GGCCGAAACT ACCTGATACC CAAAGGATTT 
GCCGTCCTTG CAACCAAAGG CCAGATCAAG CAGGCTGAAG AGCGGCTAGC TGCGCAGCGC 
CGGCGGGCCG AGGCAGCACG CAAAGAGGCT GAGGCACTCG CGGCGAAGCT GGCATCACTG 
ACGCTGACCT TCGTTGTGAA GGTCGGGGAA CAGGATCGGC TCTACGGTTC GGTGACCAAT 
GCCGACATTG CAGCGAAGCT GCACGAAGTA GCCGGTGTCG AGATCGACCG GCGCAAGATC 
GCATTGGAAG ATCCGATCAA GCGTACCGGC GAGTACGAGG TTCCGGTTGA GCTGGCAAGT 
GGTGTTTCAA CAACGCTCAA AGTGGTTGTA ACCGGCGAAT AA 

 

Protein sequence

MSAKKMKVLL LQDVEHLGKA GEIKDVSGGY GRNYLIPKGF AVLATKGQIK QAEERLAAQR 
RRAEAARKEA EALAAKLASL TLTFVVKVGE QDRLYGSVTN ADIAAKLHEV AGVEIDRRKI 
ALEDPIKRTG EYEVPVELAS GVSTTLKVVV TGE