Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_1992 |
Symbol | |
ID | 7268908 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | - |
Start bp | 2433943 |
End bp | 2435538 |
Gene Length | 1596 bp |
Protein Length | 531 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 643566823 |
Product | hypothetical protein |
Protein accession | YP_002463316 |
Protein GI | 219848883 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00260165 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCACACCT CTCAATCAAT GCGAGGCAAA AAGCTCTTTA TTGACGCAGC AATTATTTGC TTCTTAATAA TGGCTTGGTT CAAATTATGC ATGGGAATAG AATCAAGTTT GGAAGTAGAC ACTGCTGCCG ATGAGACACT CTACCTCTAT TCAGGAATCA CGCAAACCAC CCCCGCCGAC TACGGCCCGC TGTATGGCCT ATGGTATTGG CTGCTCTGGT GGACTACGCC CGATCGCATC GACCTCTACT ATTTGAACTG GCGCATGACC ACTCTCTTAC CGGTTCTCGC ATTTTACTTG ATCTGCCGAC TTAATCGAGT TACACCACTG GTTAGTGCTG TCGCAGCATG GTTATTACTC ATCTCGTCGA TCAACGTATC GACATGGCCG CGAGTATCAC ACCTTGCGCT CTTCATAGTG TTGCTAAGTC TCTCCGCGAT TAGTCTGTTA CGATCACGGA GTCGGAGCAG CTTGGCTATC GCTACCGGCT TGCTGGCAGC TAGCTATGTT CGACCGGAAT TGTTTCTTTC CTACGTTGCT GGATTAGGTG TCGTTCTGAT TGATCTCATC CGTGATTATC GCCAAAAACA GCTATTGCCA TGGCTAACAA TGATCATAAC TGGCTTCGTG CAACTAGCAC TCCTGATTTG GCAAGGGGTT CCAATGACAG GCGAGCGTAG TTTCGTTGCA TTCTCTCAAC ACTTTGCAAC AAGCTGGATA ACATGGAACA ACAGTCAGCT CGATCCTTGG AACGATTTCC CATATATTAT GCAGACTGCT TTTGGCGACG ACGTAGATAC CGTTTGGGAA GCTTTTTTGG CCAACCCGAT GTTAATTCTA CGTCATATGG TACAGAATGT CATCCGATTG TACGGTATTG CAACGCTATT ACCTGTAGGT GTCGTTCACT ACTCCGCCAC CGCTGATCGA ATAGACAAAC TCTTCTTGTG GGTAGTTCTC TTCACAGCAC TGGGAGTATT TCTGATGACC CTTCATCTCA TTCGTCGCTC AATTAGCGAA CTACTTTTTC GCAAAGAGCA CAACCGCTTG CGAGTATGGA TAATTATTTG TACATTACTA GTCTTTATAT CGATAATATC CATCTATCCA AGGCCTCACT ATTTACTTTT ACTTATACTT CCTCTGCTTT TCTTTGTTAT AGTTGTGTAT ACCGCTAATC AACCACTAAC ACCACCGAGA CTACCTGAAT TAGTATTAAC AGTTTCATTA ATGTTCTTGC TAACTCCAAT GCCATGGTGG AGTACCAACA ATCAATGGCA AACGCCGGCA CTACGCTTCT TGAATACGCT AAACTCTGTG CAACAGGCTC AATTAACAGT TTTAGTACCA CTTGACATCG CTGGACTTTA TATCCCAACG TTCAAAAAGA TAATAGCATA CCATGAAAAC GGTAATGAAT TCATGGATCT CCTTGACGAA GCCGACATCG TTATTATCGG TAGTGTATCT TCCAGCGAGA CGATCCGGCG CTTTACCAGT TATCCGCAAC AGTACGGCTT CGAACCTATA CTTGAACCGT ACATCCCAAG TTTATTTATA CGATCAGAGC ATCGTCAACT ATTCTCAACG AAATGA
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Protein sequence | MHTSQSMRGK KLFIDAAIIC FLIMAWFKLC MGIESSLEVD TAADETLYLY SGITQTTPAD YGPLYGLWYW LLWWTTPDRI DLYYLNWRMT TLLPVLAFYL ICRLNRVTPL VSAVAAWLLL ISSINVSTWP RVSHLALFIV LLSLSAISLL RSRSRSSLAI ATGLLAASYV RPELFLSYVA GLGVVLIDLI RDYRQKQLLP WLTMIITGFV QLALLIWQGV PMTGERSFVA FSQHFATSWI TWNNSQLDPW NDFPYIMQTA FGDDVDTVWE AFLANPMLIL RHMVQNVIRL YGIATLLPVG VVHYSATADR IDKLFLWVVL FTALGVFLMT LHLIRRSISE LLFRKEHNRL RVWIIICTLL VFISIISIYP RPHYLLLLIL PLLFFVIVVY TANQPLTPPR LPELVLTVSL MFLLTPMPWW STNNQWQTPA LRFLNTLNSV QQAQLTVLVP LDIAGLYIPT FKKIIAYHEN GNEFMDLLDE ADIVIIGSVS SSETIRRFTS YPQQYGFEPI LEPYIPSLFI RSEHRQLFST K
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