Gene Cagg_1957 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1957 
Symbol 
ID7268873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2390542 
End bp2391198 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content59% 
IMG OID643566795 
ProductAllophanate hydrolase subunit 1 
Protein accessionYP_002463288 
Protein GI219848855 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2049] Allophanate hydrolase subunit 1 
TIGRFAM ID[TIGR00370] conserved hypothetical protein TIGR00370 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.360214 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00204684 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACGGTAC GTATTGTCCC AATGGGTGAG GCGGCGTTAC TGGTACAGTG GTCAGTTGAT 
GAAGCTACCG CAGGTGCGCC GCTCGCGTTG ATGACTGCGT TAGAGCACCA TCCGCCGGTG
GGGCTGATCG ATCTGGTGCC GGCGATTGAT ACGTTGTTGG TGTGCTTCGA CCCGTTAGCA
ACTGACTACA CCGAAGTAAT TGCTCATGTT CAGCGTCTGA TCGCCCACTC ACAATCGCAT
GCGGTGCCGG CCGGGCGTGA GGTAACGATT CCGGTACATT ATGGCGGTGA CGCCGGGCCT
GATCTTGACA GTGTTGCTGA ACAGGTGGGG TTGTCACCTG CTGAGGTGAT CGCAATTCAT
ACGGCAACCG AGCAGCGGGT GCTAATGATC GGTTTTGCGC CGGGATACCC GTATTTGGGC
TGGCTCCCAC CGGTACTGCA TCTACCACGG CGGACAACGC CCCGTGTCGC GGTGCCGGCC
GGTTCGGTGG CAATCGCGGC CGGTATGACC GGTATCTACC CTGCTGTCTT GCCCGGTGGT
TGGCATTTGA TCGGACGCAC CGACGTGCGT TTGTTCGATC CAACTGCCAA TCCACCGTGT
CTCCTGCAAC CCGGTGATCG GGTGCGGTTT GTGAACGTAG AGGCGCAAAG GGGGTAA
 
Protein sequence
MTVRIVPMGE AALLVQWSVD EATAGAPLAL MTALEHHPPV GLIDLVPAID TLLVCFDPLA 
TDYTEVIAHV QRLIAHSQSH AVPAGREVTI PVHYGGDAGP DLDSVAEQVG LSPAEVIAIH
TATEQRVLMI GFAPGYPYLG WLPPVLHLPR RTTPRVAVPA GSVAIAAGMT GIYPAVLPGG
WHLIGRTDVR LFDPTANPPC LLQPGDRVRF VNVEAQRG