Gene Cagg_1926 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1926 
Symbol 
ID7268841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2359015 
End bp2359539 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content54% 
IMG OID643566763 
Productphage shock protein C, PspC 
Protein accessionYP_002463257 
Protein GI219848824 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1983] Putative stress-responsive transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000470088 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000972351 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGCAGACTC GACTAACGCG CAGCAGCACC GATAAAATGA TCGGCGGCAT TTGTGGTGGA 
TTAGCCCGCT ACTTTAGCGT CGATCCGGTT ATCGTCCGCC TCATCTTTGT ATTGGTCTTT
TTCATCAACG GCATTAGTTT GCCGATCTAT CTGGTGTTAT GGATCATTAT GCCGAAGGAT
ACCCCGCCGC AACATCCATC CTTCACGTCA GGGGTAACGC CGCAGCCGCA AGAGATGTTT
GTCGGTCAGG GCCAGGTGAG TGGGCAAGCA CGAGTAGGCT ATGCCCCTAA TCCCGGCTAT
CGGTTTGATC CGCTCACCGG TCAACCGATC GAAGGACCGG CCACCGGCGA GACGGTGCAA
TTAGGACCGG CGACACCGCG CCGACGCAAT TGGAGCTTAT TGGGAATGAT TCTGATCGGA
GTGGGCGGGA TCATTATCCT CGAGCAAATG GGGGTTAATC TCTCGTTACT CTTCCCGGTG
TTGATGATTA TTGCGGGTTT CGTACTCTTG CGACGGGCAC GGTAG
 
Protein sequence
MQTRLTRSST DKMIGGICGG LARYFSVDPV IVRLIFVLVF FINGISLPIY LVLWIIMPKD 
TPPQHPSFTS GVTPQPQEMF VGQGQVSGQA RVGYAPNPGY RFDPLTGQPI EGPATGETVQ
LGPATPRRRN WSLLGMILIG VGGIIILEQM GVNLSLLFPV LMIIAGFVLL RRAR