| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_1925 |
|---|
| Symbol | |
|---|
| ID | 7268840 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | + |
|---|
| Start bp | 2358252 |
|---|
| End bp | 2358806 |
|---|
| Gene Length | 555 bp |
|---|
| Protein Length | 184 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 643566762 |
|---|
| Product | Appr-1-p processing domain protein |
|---|
| Protein accession | YP_002463256 |
|---|
| Protein GI | 219848823 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2110] Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.000389838 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.0000000101256 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGACCGATC TTCCGGCACT TCAGATTGGT CAGGCCCGGA TCGAGCTTTG CGAGGGTGAT
ATTGTGACCC AATCAGTGGA TGCGATTGTC AATGCAGCGA ACGAGCAGTT GCGCCAGGGT
GGTGGTGTAT GCGGTGCGAT CTTCCGCGCC GCCGGTGCAG CAGATCTGCA ACGGGCGTGC
GACGCTGTGG CTCCTTGTCC AACCGGCGAA GCGCGGATTA CGCCCGGTTT TGCCTTACCG
GCTCGGTACG TCATCCACGC TGTAGGTCCG ATCTTTGATA GCTACTCGCC GACTGAAGCC
GACCGGTTGT TGGTCAGCGC TTATCGAGCG AGTCTGGCGC TAGCCCGTCA GTATGGAGTA
CGTAGCATTG CTTTTCCGAG CATCGCCACC GGTATTTATG GCTTTCCGGT CGAGCGAGCG
GCTCCACTAG TGATACGTAC ATTGGTCGAT GAACTTCGTG TGCATCAGTC ACCGGCATTG
GTGCGGATGG TGTTGTGGCG AGATACGTTT CCGGTGTATC GCGCAGCATT GGCACAGATT
GCGGCGACAA GCTAG
|
|---|
| Protein sequence | MTDLPALQIG QARIELCEGD IVTQSVDAIV NAANEQLRQG GGVCGAIFRA AGAADLQRAC
DAVAPCPTGE ARITPGFALP ARYVIHAVGP IFDSYSPTEA DRLLVSAYRA SLALARQYGV
RSIAFPSIAT GIYGFPVERA APLVIRTLVD ELRVHQSPAL VRMVLWRDTF PVYRAALAQI
AATS
|
|---|
| |